Characterization of DNA methyltransferase specificities using single-molecule, real-time DNA sequencing - Test2 - elhamkhani - TriplyDB

Characterization of DNA methyltransferase specificities using single-molecule, real-time DNA sequencing

Characterization of DNA methyltransferase specificities using single-molecule, real-time DNA sequencing

http://www.wikidata.org/entity/Q30470204

about

The COMBREX project: design, methodology, and initial results.Comprehensive methylome characterization of Mycoplasma genitalium and Mycoplasma pneumoniae at single-base resolution Modeling kinetic rate variation in third generation DNA sequencing data to detect putative modifications to DNA bases The methylomes of six bacteria.Entering the era of bacterial epigenomics with single molecule real time DNA sequencing Next-generation sequencing as an approach to dairy starter selection Bacteriophage orphan DNA methyltransferases: insights from their bacterial origin, function, and occurrence The Complete Genome Sequence of the Murine Pathobiont Helicobacter typhlonius.The Epigenomic Landscape of Prokaryotes The advantages of SMRT sequencing Comparative genomics of the Campylobacter lari group Objective: biochemical function Genomic mapping of phosphorothioates reveals partial modification of short consensus sequences Global methylation state at base-pair resolution of the Caulobacter genome throughout the cell cycle.Genome-wide mapping of methylated adenine residues in pathogenic Escherichia coli using single-molecule real-time sequencing.Enhanced 5-methylcytosine detection in single-molecule, real-time sequencing via Tet1 oxidation.Direct sequencing of small genomes on the Pacific Biosciences RS without library preparation The complex methylome of the human gastric pathogen Helicobacter pylori Super-resolution optical DNA Mapping via DNA methyltransferase-directed click chemistry.Gill bacteria enable a novel digestive strategy in a wood-feeding mollusk.Detecting DNA modifications from SMRT sequencing data by modeling sequence context dependence of polymerase kinetic.Simultaneous sequencing of oxidized methylcytosines produced by TET/JBP dioxygenases in Coprinopsis cinerea.The complete methylome of Helicobacter pylori UM032 A biphasic epigenetic switch controls immunoevasion, virulence and niche adaptation in non-typeable Haemophilus influenzae.qDNAmod: a statistical model-based tool to reveal intercellular heterogeneity of DNA modification from SMRT sequencing data.Exploring possible DNA structures in real-time polymerase kinetics using Pacific Biosciences sequencer data A comparative analysis of methylome profiles of Campylobacter jejuni sheep abortion isolate and gastroenteric strains using PacBio data.Long-read, whole-genome shotgun sequence data for five model organisms Integrating DNA Methylation and Gene Expression Data in the Development of the Soybean-Bradyrhizobium N2-Fixing Symbiosis.Quality Control of the Traditional Patent Medicine Yimu Wan Based on SMRT Sequencing and DNA Barcoding The methylome of the gut microbiome: disparate Dam methylation patterns in intestinal Bacteroides dorei.Strain Kaplan of Pseudorabies Virus Genome Sequenced by PacBio Single-Molecule Real-Time Sequencing Technology.Complete Genome Sequence of the Freshwater Colorless Sulfur Bacterium Beggiatoa leptomitiformis Neotype Strain D-402T Unlocking the mystery of the hard-to-sequence phage genome: PaP1 methylome and bacterial immunity Reversible positioning of single molecules inside zero-mode waveguides A random six-phase switch regulates pneumococcal virulence via global epigenetic changes DNA methyltransferase accessibility protocol for individual templates by deep sequencing A mimicking-of-DNA-methylation-patterns pipeline for overcoming the restriction barrier of bacteria Specificity of the ModA11, ModA12 and ModD1 epigenetic regulator N(6)-adenine DNA methyltransferases of Neisseria meningitidis.Fidelity index determination of DNA methyltransferases.

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Characterization of DNA methyltransferase specificities using single-molecule, real-time DNA sequencing

http://www.wikidata.org/entity/Q30470204

description

2011 nî lūn-bûn

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2011 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած

@hyw

2011 թվականի դեկտեմբերին հրատարակված գիտական հոդված

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2011年の論文

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2011年学术文章

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2011年学术文章

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2011年学术文章

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2011年学术文章

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2011年学术文章

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2011年學術文章

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name

Characterization of DNA methyl ...... cule, real-time DNA sequencing

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Characterization of DNA methyl ...... cule, real-time DNA sequencing

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Characterization of DNA methyl ...... cule, real-time DNA sequencing

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Characterization of DNA methyl ...... cule, real-time DNA sequencing

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Characterization of DNA methyl ...... cule, real-time DNA sequencing

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Characterization of DNA methyl ...... cule, real-time DNA sequencing

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Nucleic Acids Research

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Characterization of DNA methyl ...... cule, real-time DNA sequencing

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P2093

Alexey Fomenkov

http://www.w3.org/2001/XMLSchema#string

Andrey O Kislyuk

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Iain A Murray

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Jonas Korlach

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Kristi E Spittle

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Matthew Boitano

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Richard D Morgan

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The nuclear DNA base 5-hydroxymethylcytosine is present in Purkinje neurons and the brain

Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1

The presence of 5-hydroxymethylcytosine in animal deoxyribonucleic acid

Direct detection of methylation in genomic DNA

A genomic sequencing protocol that yields a positive display of 5-methylcytosine residues in individual DNA strands

The DNA (cytosine-5) methyltransferases

Alw26I, Eco31I and Esp3I--type IIs methyltransferases modifying cytosine and adenine in complementary strands of the target DNA

Methylation-specific PCR: a novel PCR assay for methylation status of CpG islands

Human DNA methylomes at base resolution show widespread epigenomic differences

REBASE--a database for DNA restriction and modification: enzymes, genes and genomes

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scholarly article

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10.1093/NAR/GKR1146

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4

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40

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Richard Roberts

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2011-12-07T00:00:00Z

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51866251

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22156058

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3287169

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