Predictive computation of genomic logic processing functions in embryonic development. - Test2 - elhamkhani - TriplyDB

Predictive computation of genomic logic processing functions in embryonic development.

Predictive computation of genomic logic processing functions in embryonic development.

http://www.wikidata.org/entity/Q30525789

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Boolean modelling reveals new regulatory connections between transcription factors orchestrating the development of the ventral spinal cord Towards 3D in silico modeling of the sea urchin embryonic development Gene regulatory systems that control gene expression in the Ciona embryo A digital framework to build, visualize and analyze a gene expression atlas with cellular resolution in zebrafish early embryogenesis The significance and scope of evolutionary developmental biology: a vision for the 21st century Evolutionary rewiring of gene regulatory network linkages at divergence of the echinoid subclasses The Comet Cometh: Evolving Developmental Systems The biological microprocessor, or how to build a computer with biological parts Insights into neural crest development and evolution from genomic analysis A cell-based computational model of early embryogenesis coupling mechanical behaviour and gene regulation.Eric Davidson (1937-2015) and the past, present and future of EvoDevo An integrated modelling framework from cells to organism based on a cohort of digital embryos Reconstructing blood stem cell regulatory network models from single-cell molecular profiles Assessing regulatory information in developmental gene regulatory networks Latent phenotypes pervade gene regulatory circuits.Applying gene regulatory network logic to the evolution of social behavior.Buffered Qualitative Stability explains the robustness and evolvability of transcriptional networks.Models of human core transcriptional regulatory circuitries.Specific functions of the Wnt signaling system in gene regulatory networks throughout the early sea urchin embryo.Gene regulatory networks governing lung specification.Constraint and contingency in multifunctional gene regulatory circuits.Time scales in epigenetic dynamics and phenotypic heterogeneity of embryonic stem cells A discrete model of Drosophila eggshell patterning reveals cell-autonomous and juxtacrine effects Geometric control of ciliated band regulatory states in the sea urchin embryo.Phenotypic robustness and the assortativity signature of human transcription factor networks.Loregic: a method to characterize the cooperative logic of regulatory factors Layering genetic circuits to build a single cell, bacterial half adder Function does not follow form in gene regulatory circuits Noncommutative Biology: Sequential Regulation of Complex Networks.Qualitative Dynamical Modelling Can Formally Explain Mesoderm Specification and Predict Novel Developmental Phenotypes Developmental biologist Eric H. Davidson, 1937-2015 Estimating optimal sparseness of developmental gene networks using a semi-quantitative model Boolean modeling of gene regulatory networks: Driesch redux.Gene regulatory control in the sea urchin aboral ectoderm: spatial initiation, signaling inputs, and cell fate lockdown.On the Relationship of Protein and mRNA Dynamics in Vertebrate Embryonic Development Eric Davidson: Steps to a gene regulatory network for development.A new software package for predictive gene regulatory network modeling and redesign.Quantitative developmental transcriptomes of the sea urchin Strongylocentrotus purpuratus.Encoding regulatory state boundaries in the pregastrular oral ectoderm of the sea urchin embryo.Design principles of regulatory networks: searching for the molecular algorithms of the cell.

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Predictive computation of genomic logic processing functions in embryonic development.

http://www.wikidata.org/entity/Q30525789

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2012 թուականի Օգոստոսին հրատարակուած գիտական յօդուած

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Predictive computation of genomic logic processing functions in embryonic development.

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Predictive computation of genomic logic processing functions in embryonic development.

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PNAS.1207852109

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Proceedings of the National Academy of Sciences of the United States of America

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Predictive computation of genomic logic processing functions in embryonic development.

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Emmanuel Faure

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Eric H Davidson

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Isabelle S Peter

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P2860

High accuracy, high-resolution prevalence measurement for the majority of locally expressed regulatory genes in early sea urchin development

Spatial analysis of expression patterns predicts genetic interactions at the mid-hindbrain boundary

The topology of the regulatory interactions predicts the expression pattern of the segment polarity genes in Drosophila melanogaster

Modularity and design principles in the sea urchin embryo gene regulatory network.

Information processing at the foxa node of the sea urchin endomesoderm specification network.

Logic functions of the genomic cis-regulatory code.

Three habits of highly effective signaling pathways: principles of transcriptional control by developmental cell signaling.

Wnt6 activates endoderm in the sea urchin gene regulatory network.

Transcriptional regulatory cascades in development: initial rates, not steady state, determine network kinetics.

Gene regulatory logic for reading the Sonic Hedgehog signaling gradient in the vertebrate neural tube.

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16434-16442

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