High-resolution definition of the Vibrio cholerae essential gene set with hidden Markov model-based analyses of transposon-insertion sequencing data
about
Genomic location of the major ribosomal protein gene locus determines Vibrio cholerae global growth and infectivityARTIST: high-resolution genome-wide assessment of fitness using transposon-insertion sequencingStatistical Analysis of Hurst Exponents of Essential/Nonessential Genes in 33 Bacterial GenomesPIMMS (Pragmatic Insertional Mutation Mapping System) Laboratory Methodology a Readily Accessible Tool for Identification of Essential Genes in StreptococcusA Genome-Wide Screen Reveals that the Vibrio cholerae Phosphoenolpyruvate Phosphotransferase System Modulates Virulence Gene ExpressionA Cytosine Methyltransferase Modulates the Cell Envelope Stress Response in the Cholera Pathogen [corrected].Essential genome of Pseudomonas aeruginosa in cystic fibrosis sputum.A zero-inflated Poisson model for insertion tolerance analysis of genes based on Tn-seq data.Combining Shigella Tn-seq data with gold-standard E. coli gene deletion data suggests rare transitions between essential and non-essential gene functionality.The highly conserved bacterial RNase YbeY is essential in Vibrio cholerae, playing a critical role in virulence, stress regulation, and RNA processingTransposon insertion sequencing reveals T4SS as the major genetic trait for conjugation transfer of multi-drug resistance pEIB202 from EdwardsiellaDisruption of Mycobacterium avium subsp. paratuberculosis-specific genes impairs in vivo fitnessStatistical analysis of genetic interactions in Tn-Seq data.Essential Genes in the Core Genome of the Human Pathogen Streptococcus pyogenes.Comprehensive Essentiality Analysis of the Mycobacterium tuberculosis Genome via Saturating Transposon Mutagenesis.Genome-wide mutant fitness profiling identifies nutritional requirements for optimal growth of Yersinia pestis in deep tissue.The essential gene set of a photosynthetic organism.Cell separation in Vibrio cholerae is mediated by a single amidase whose action is modulated by two nonredundant activatorsHigh-resolution genetic analysis of the requirements for horizontal transmission of the ESBL plasmid from Escherichia coli O104:H4.Gene fitness landscapes of Vibrio cholerae at important stages of its life cycleGenome-scale metabolic network validation of Shewanella oneidensis using transposon insertion frequency analysisA new platform for ultra-high density Staphylococcus aureus transposon librariesConstruction of a mariner-based transposon vector for use in insertion sequence mutagenesis in selected members of the Rhizobiaceae.The design and analysis of transposon insertion sequencing experiments.Multidrug Intrinsic Resistance Factors in Staphylococcus aureus Identified by Profiling Fitness within High-Diversity Transposon Libraries.The Nucleoid Binding Protein H-NS Biases Genome-Wide Transposon Insertion Landscapes.Regional Control of Chromosome Segregation in Pseudomonas aeruginosa.Peptidoglycan synthesis in Mycobacterium tuberculosis is organized into networks with varying drug susceptibility.A D, D-carboxypeptidase is required for Vibrio cholerae halotolerance.MAGenTA; a Galaxy implemented tool for complete Tn-Seq analysis and data visualization.Genetic analysis of Vibrio parahaemolyticus intestinal colonizationEssentiality of threonylcarbamoyladenosine (t(6)A), a universal tRNA modification, in bacteria.Infant Rabbit Model for Diarrheal Diseases.Composition of the DNA-uptake complex of Vibrio cholerae.Tn-Seq analysis of Vibrio cholerae intestinal colonization reveals a role for T6SS-mediated antibacterial activity in the hostThe Proximity of Ribosomal Protein Genes to oriC Enhances Vibrio cholerae Fitness in the Absence of Multifork Replication.Proteomic analysis of Vibrio cholerae outer membrane vesicles.Differential requirement for PBP1a and PBP1b in in vivo and in vitro fitness of Vibrio choleraeIdentification of in vivo regulators of the Vibrio cholerae xds gene using a high-throughput genetic selection.DNA methyltransferases and epigenetic regulation in bacteria.
P2860
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P2860
High-resolution definition of the Vibrio cholerae essential gene set with hidden Markov model-based analyses of transposon-insertion sequencing data
description
2013 nî lūn-bûn
@nan
2013 թուականի Յուլիսին հրատարակուած գիտական յօդուած
@hyw
2013 թվականի հուլիսին հրատարակված գիտական հոդված
@hy
2013年の論文
@ja
2013年論文
@yue
2013年論文
@zh-hant
2013年論文
@zh-hk
2013年論文
@zh-mo
2013年論文
@zh-tw
2013年论文
@wuu
name
High-resolution definition of ...... oson-insertion sequencing data
@ast
High-resolution definition of ...... oson-insertion sequencing data
@en
type
label
High-resolution definition of ...... oson-insertion sequencing data
@ast
High-resolution definition of ...... oson-insertion sequencing data
@en
prefLabel
High-resolution definition of ...... oson-insertion sequencing data
@ast
High-resolution definition of ...... oson-insertion sequencing data
@en
P2093
P2860
P356
P1476
High-resolution definition of ...... oson-insertion sequencing data
@en
P2093
Brigid M Davis
Jonathan Livny
Justin R Pritchard
Matthew K Waldor
Yanjia J Zhang
P2860
P304
P356
10.1093/NAR/GKT654
P407
P577
2013-07-30T00:00:00Z