Impact of artifact removal on ChIP quality metrics in ChIP-seq and ChIP-exo data.
about
Uncovering correlated variability in epigenomic datasets using the Karhunen-Loeve transformPAtCh-Cap: input strategy for improving analysis of ChIP-exo data sets and beyondQuality assessment and control of high-throughput sequencing data.Quantifying the impact of inter-site heterogeneity on the distribution of ChIP-seq dataRetrieving Chromatin Patterns from Deep Sequencing Data Using Correlation Functions.Prenatal Exposure to a Maternal High-Fat Diet Affects Histone Modification of Cardiometabolic Genes in Newborn Rats.Analytical tools and current challenges in the modern era of neuroepigenomicshistoneHMM: Differential analysis of histone modifications with broad genomic footprints.Chromatin Signature Identifies Monoallelic Gene Expression Across Mammalian Cell TypesChiLin: a comprehensive ChIP-seq and DNase-seq quality control and analysis pipeline.Q-nexus: a comprehensive and efficient analysis pipeline designed for ChIP-nexus.BaalChIP: Bayesian analysis of allele-specific transcription factor binding in cancer genomes.Identification of Candidate Functional Elements in the Genome from ChIP-seq Data.Genome-wide analysis reveals positional-nucleosome-oriented binding pattern of pioneer factor FOXA1.Neonatal monocytes exhibit a unique histone modification landscape.Z-DNA-forming sites identified by ChIP-Seq are associated with actively transcribed regions in the human genome.CIPHER: a flexible and extensive workflow platform for integrative next-generation sequencing data analysis and genomic regulatory element prediction.Chromatin Immunoprecipitation-Sequencing (ChIP-seq) for Mapping of Estrogen Receptor-Chromatin Interactions in Breast Cancer.Bioinformatics Analysis of Small RNA Transcriptomes: The Detailed Workflow.Alterations to chromatin in intestinal macrophages link IL-10 deficiency to inappropriate inflammatory responses.Data exploration, quality control and statistical analysis of ChIP-exo/nexus experiments.A high-resolution map of transcriptional repression.Ritornello: high fidelity control-free chromatin immunoprecipitation peak calling.Analysis of ChIP-seq Data in R/Bioconductor.Mapping genome-wide transcription-factor binding sites using DAP-seq.FOXF1 defines the core-regulatory circuitry in gastrointestinal stromal tumor (GIST).Variation in DNA-Damage Responses to an Inhalational Carcinogen (1,3-Butadiene) in Relation to Strain-Specific Differences in Chromatin Accessibility and Gene Transcription Profiles in C57BL/6J and CAST/EiJ Mice.Gene-specific mechanisms direct Glucocorticoid Receptor-driven repression of inflammatory response genes in macrophages.A comprehensive map coupling histone modifications with gene regulation in adult dopaminergic and serotonergic neurons.Parallel factor ChIP provides essential internal control for quantitative differential ChIP-seq.NOTCH-mediated non-cell autonomous regulation of chromatin structure during senescence.Robustness of Transposable Element Regulation but No Genomic Shock Observed in Interspecific Arabidopsis Hybrids.The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family
P2860
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P2860
Impact of artifact removal on ChIP quality metrics in ChIP-seq and ChIP-exo data.
description
2014 nî lūn-bûn
@nan
2014 թուականի Ապրիլին հրատարակուած գիտական յօդուած
@hyw
2014 թվականի ապրիլին հրատարակված գիտական հոդված
@hy
2014年の論文
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2014年学术文章
@wuu
2014年学术文章
@zh-cn
2014年学术文章
@zh-hans
2014年学术文章
@zh-my
2014年学术文章
@zh-sg
2014年學術文章
@yue
name
Impact of artifact removal on ChIP quality metrics in ChIP-seq and ChIP-exo data.
@ast
Impact of artifact removal on ChIP quality metrics in ChIP-seq and ChIP-exo data.
@en
type
label
Impact of artifact removal on ChIP quality metrics in ChIP-seq and ChIP-exo data.
@ast
Impact of artifact removal on ChIP quality metrics in ChIP-seq and ChIP-exo data.
@en
prefLabel
Impact of artifact removal on ChIP quality metrics in ChIP-seq and ChIP-exo data.
@ast
Impact of artifact removal on ChIP quality metrics in ChIP-seq and ChIP-exo data.
@en
P2860
P50
P356
P1476
Impact of artifact removal on ChIP quality metrics in ChIP-seq and ChIP-exo data.
@en
P2093
Thomas S Carroll
Ziwei Liang
P2860
P356
10.3389/FGENE.2014.00075
P577
2014-04-10T00:00:00Z