Identifying metabolic enzymes with multiple types of association evidence. - Test2 - elhamkhani - TriplyDB

Identifying metabolic enzymes with multiple types of association evidence.

Identifying metabolic enzymes with multiple types of association evidence.

http://www.wikidata.org/entity/Q33237950

about

Identification of genes encoding tRNA modification enzymes by comparative genomics Reconstruction and validation of RefRec: a global model for the yeast molecular interaction network.The CanOE strategy: integrating genomic and metabolic contexts across multiple prokaryote genomes to find candidate genes for orphan enzymes Prediction and identification of sequences coding for orphan enzymes using genomic and metagenomic neighbours The MORPH-R web server and software tool for predicting missing genes in biological pathways.Systematic assignment of thermodynamic constraints in metabolic network models.Classification of microarray data using gene networks An improved method for identifying functionally linked proteins using phylogenetic profiles.Genome-scale models of bacterial metabolism: reconstruction and applications.GrowMatch: an automated method for reconciling in silico/in vivo growth predictions Evolutionary constraints permeate large metabolic networks A systematic study of genome context methods: calibration, normalization and combination.Genome-wide discovery of missing genes in biological pathways of prokaryotes.Network-based scoring system for genome-scale metabolic reconstructions Synergistic use of plant-prokaryote comparative genomics for functional annotations The human metabolic reconstruction Recon 1 directs hypotheses of novel human metabolic functions Automatic policing of biochemical annotations using genomic correlations Reconstruction and flux-balance analysis of the Plasmodium falciparum metabolic network.'Unknown' proteins and 'orphan' enzymes: the missing half of the engineering parts list--and how to find it CINPER: an interactive web system for pathway prediction for prokaryotes The growing scope of applications of genome-scale metabolic reconstructions using Escherichia coli.Semi-automated curation of metabolic models via flux balance analysis: a case study with Mycoplasma gallisepticum Systematizing the generation of missing metabolic knowledge.Chromosomal periodicity of evolutionarily conserved gene pairs.Gap detection for genome-scale constraint-based models.Computational prediction and experimental verification of the gene encoding the NAD+/NADP+-dependent succinate semialdehyde dehydrogenase in Escherichia coli.Developing of the Computer Method for Annotation of Bacterial Genes.Making the connections--the crucial role of metabolite transporters at the interface between chloroplast and cytosol.Global probabilistic annotation of metabolic networks enables enzyme discovery.EFICAz2: enzyme function inference by a combined approach enhanced by machine learning.Missing gene identification using functional coherence scores Gene expression profiling and the use of genome-scale in silico models of Escherichia coli for analysis: providing context for content.Genome-scale metabolic networks.Profiling the orphan enzymes.Pantograph: A template-based method for genome-scale metabolic model reconstruction.Genome scale models of yeast: towards standardized evaluation and consistent omic integration.Constructing module maps for integrated analysis of heterogeneous biological networks.Genome-scale metabolic models as platforms for strain design and biological discovery.Bioinformatics tools for the identification of gene clusters that biosynthesize specialized metabolites.Use of a global metabolic network to curate organismal metabolic networks.

P2860

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P2860

Identifying metabolic enzymes with multiple types of association evidence.

http://www.wikidata.org/entity/Q33237950

description

2006 nî lūn-bûn

@nan

2006 թուականի Մարտին հրատարակուած գիտական յօդուած

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2006 թվականի մարտին հրատարակված գիտական հոդված

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2006年の論文

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2006年論文

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2006年論文

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2006年論文

@zh-hk

2006年論文

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2006年論文

@zh-tw

2006年论文

@wuu

name

Identifying metabolic enzymes with multiple types of association evidence.

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Identifying metabolic enzymes with multiple types of association evidence.

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type

label

Identifying metabolic enzymes with multiple types of association evidence.

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Identifying metabolic enzymes with multiple types of association evidence.

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prefLabel

Identifying metabolic enzymes with multiple types of association evidence.

@ast

Identifying metabolic enzymes with multiple types of association evidence.

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BMC Bioinformatics

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Identifying metabolic enzymes with multiple types of association evidence.

@en

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Dennis Vitkup

http://www.w3.org/2001/XMLSchema#string

Lifeng Chen

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Peter Kharchenko

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Yoav Freund

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P2860

An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR)

Identification of the human methylmalonyl-CoA racemase gene based on the analysis of prokaryotic gene arrangements. Implications for decoding the human genome

Functional organization of the yeast proteome by systematic analysis of protein complexes

Genome-scale reconstruction of the Saccharomyces cerevisiae metabolic network

Genomic gene clustering analysis of pathways in eukaryotes

The COG database: new developments in phylogenetic classification of proteins from complete genomes

The use of gene clusters to infer functional coupling

STRING: a database of predicted functional associations between proteins

A Bayesian method for identifying missing enzymes in predicted metabolic pathway databases

Similarities and differences in genome-wide expression data of six organisms

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1471-2105-7-177

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177

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10.1186/1471-2105-7-177

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7

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George M. Church

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