Explicit ion, implicit water solvation for molecular dynamics of nucleic acids and highly charged molecules.
about
The role of methylation in the intrinsic dynamics of B- and Z-DNAPreferential binding effects on protein structure and dynamics revealed by coarse-grained Monte Carlo simulation.Progress in developing Poisson-Boltzmann equation solvers.How cations can assist DNase I in DNA binding and hydrolysis.Differential geometry based solvation model I: Eulerian formulation.Cy3-DNA stacking interactions strongly depend on the identity of the terminal basepair.Poisson-Nernst-Planck equations for simulating biomolecular diffusion-reaction processes II: size effects on ionic distributions and diffusion-reaction rates.Differential geometry based solvation model II: Lagrangian formulation.On the role of electrostatics in protein-protein interactions.Predicting the DNA sequence dependence of nanopore ion current using atomic-resolution Brownian dynamics.Discretization of the induced-charge boundary integral equation.A novel implicit solvent model for simulating the molecular dynamics of RNARoles of boundary conditions in DNA simulations: analysis of ion distributions with the finite-difference Poisson-Boltzmann methodNuance in the double-helix and its role in protein-DNA recognition.Performance of Nonlinear Finite-Difference Poisson-Boltzmann Solvers.MIBPB: a software package for electrostatic analysis.Assessing the performance of implicit solvation models at a nucleic acid surface.Differential geometry based multiscale models.Ionic Solution: What Goes Right and Wrong with Continuum Solvation Modeling.Fractional Poisson-Nernst-Planck Model for Ion Channels I: Basic Formulations and Algorithms.ESES: Software for Eulerian solvent excluded surface.The "sugar" coarse-grained DNA model.A New Poisson-Nernst-Planck Model with Ion-Water Interactions for Charge Transport in Ion Channels.Interpreting the Coulomb-field approximation for generalized-Born electrostatics using boundary-integral equation theory.Explicit ions/implicit water generalized Born model for nucleic acids
P2860
Q21134614-42A74D47-3E37-4C62-884F-FFC828248031Q30402197-27B206E7-F87F-40FC-ADF4-F1E65438F284Q30447589-B73F52B8-2349-4EE6-90AD-4C08C9323FB4Q33761257-A2648BBA-AE2C-40D6-BF38-08049AE86C38Q34183931-DFFD3EF1-DE4F-404D-96E4-FF2BF50A95E1Q34568152-82A3BEC3-C934-429D-B457-2F445A3AF484Q34978141-94896D2E-A994-48BD-A9DD-BBDB1AADBA39Q35041180-D98ED16F-4004-48A1-9391-2571355376CDQ35107618-CDC39F5F-E6F7-4967-A79C-6B4FD35E1F35Q35954697-EF84FEA2-6066-4079-AFD3-687B2C95F7ABQ36979124-3EF790B8-BC17-4AB5-93B4-A0005DA39257Q37145710-62C06526-620F-494D-8BEE-BF26486D8E59Q37263327-548265A1-B777-4826-AEFB-E345BA7449C0Q37442208-9C9EB095-35B8-46CA-86F9-2B22EC8FC263Q38658570-B0B45A60-BAE4-433D-92E8-6B22A3F95AFFQ41260030-DF82D23B-F63B-434F-8142-01A39A41B2CCQ41958867-56FC850C-796A-4AC0-9454-161FB407A778Q42589738-A849E823-20D4-4276-BD42-48B508D8C33BQ47159985-7884AAEC-1DA7-4F23-A545-ECD27EFAEDBCQ47676893-94647866-A1BA-41DD-86AC-78B0BDB550E9Q48022565-25E20F3E-5CAB-4917-9DBF-70A44E9AD476Q48047632-51819941-9E11-4D76-8E1E-8F59927FE880Q48055153-512A85CC-CB73-408A-A412-9DFCBBB6C908Q48311698-03EDA8C7-E65D-4DCF-8E18-769A774D4933Q57301293-19201350-77B7-4C85-99BC-51E016C4E5D0
P2860
Explicit ion, implicit water solvation for molecular dynamics of nucleic acids and highly charged molecules.
description
2008 nî lūn-bûn
@nan
2008 թուականի Մայիսին հրատարակուած գիտական յօդուած
@hyw
2008 թվականի մայիսին հրատարակված գիտական հոդված
@hy
2008年の論文
@ja
2008年論文
@yue
2008年論文
@zh-hant
2008年論文
@zh-hk
2008年論文
@zh-mo
2008年論文
@zh-tw
2008年论文
@wuu
name
Explicit ion, implicit water s ...... and highly charged molecules.
@ast
Explicit ion, implicit water s ...... and highly charged molecules.
@en
Explicit ion, implicit water s ...... and highly charged molecules.
@nl
type
label
Explicit ion, implicit water s ...... and highly charged molecules.
@ast
Explicit ion, implicit water s ...... and highly charged molecules.
@en
Explicit ion, implicit water s ...... and highly charged molecules.
@nl
prefLabel
Explicit ion, implicit water s ...... and highly charged molecules.
@ast
Explicit ion, implicit water s ...... and highly charged molecules.
@en
Explicit ion, implicit water s ...... and highly charged molecules.
@nl
P2093
P356
P1476
Explicit ion, implicit water s ...... and highly charged molecules.
@en
P2093
Kim A Sharp
Manoranjan Panda
Ninad V Prabhu
Qingyi Yang
P2860
P304
P356
10.1002/JCC.20874
P577
2008-05-01T00:00:00Z