ProteoWizard: open source software for rapid proteomics tools development. - Test2 - elhamkhani - TriplyDB

ProteoWizard: open source software for rapid proteomics tools development.

ProteoWizard: open source software for rapid proteomics tools development.

http://www.wikidata.org/entity/Q33349681

about

A systematic analysis of eluted fraction of plasma post immunoaffinity depletion: implications in biomarker discovery Proteomic analysis of the enterocyte brush border Towards elucidating the stability, dynamics and architecture of the nucleosome remodeling and deacetylase complex by using quantitative interaction proteomics Protein interaction network of the mammalian Hippo pathway reveals mechanisms of kinase-phosphatase interactions Deciphering of ADP-induced, phosphotyrosine-dependent signaling networks in human platelets by Src-homology 2 region (SH2)-profiling A cross-platform toolkit for mass spectrometry and proteomics A tutorial for software development in quantitative proteomics using PSI standard formats MZmine 2: modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data SUMO1 Affects Synaptic Function, Spine Density and Memory Hair-bundle proteomes of avian and mammalian inner-ear utricles.BioID-based Identification of Skp Cullin F-box (SCF)β-TrCP1/2 E3 Ligase Substrates.KCMF1 (potassium channel modulatory factor 1) Links RAD6 to UBR4 (ubiquitin N-recognin domain-containing E3 ligase 4) and lysosome-mediated degradation.Serine is a natural ligand and allosteric activator of pyruvate kinase M2 A Strategy for Modulation of Enzymes in the Ubiquitin System Structural analysis of the yeast Dhh1-Pat1 complex reveals how Dhh1 engages Pat1, Edc3 and RNA in mutually exclusive interactions Structure and RNA-binding properties of the Not1-Not2-Not5 module of the yeast Ccr4-Not complex Automatic recalibration and processing of tandem mass spectra using formula annotation Novel N-terminal and Lysine Methyltransferases That Target Translation Elongation Factor 1A in Yeast and Human.Intermembrane space proteome of yeast mitochondria.Interrogating the Plasmodium Sporozoite Surface: Identification of Surface-Exposed Proteins and Demonstration of Glycosylation on CSP and TRAP by Mass Spectrometry-Based Proteomics OpenMS: a flexible open-source software platform for mass spectrometry data analysis MSiReader: an open-source interface to view and analyze high resolving power MS imaging files on Matlab platform Metabolic consequences of interleukin-6 challenge in developing neurons and astroglia Src homology 2 domain containing protein 5 (SH2D5) binds the breakpoint cluster region protein, BCR, and regulates levels of Rac1-GTP The microvesicle component of HIV-1 inocula modulates dendritic cell infection and maturation and enhances adhesion to and activation of T lymphocytes Quorum sensing signal production and microbial interactions in a polymicrobial disease of corals and the coral surface mucopolysaccharide layer The Human Adenovirus Type 5 E4orf4 Protein Targets Two Phosphatase Regulators of the Hippo Signaling Pathway Transgenic Soybean Production of Bioactive Human Epidermal Growth Factor (EGF)A large dataset of protein dynamics in the mammalian heart proteome Illuminating structural proteins in viral "dark matter" with metaproteomics COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access MassCascade: Visual Programming for LC-MS Data Processing in Metabolomics Development of data representation standards by the human proteome organization proteomics standards initiative Trans-Proteomic Pipeline, a standardized data processing pipeline for large-scale reproducible proteomics informatics Fast and Efficient XML Data Access for Next-Generation Mass Spectrometry Direct infusion mass spectrometry metabolomics dataset: a benchmark for data processing and quality control Processing shotgun proteomics data on the Amazon cloud with the trans-proteomic pipeline Employing ProteoWizard to Convert Raw Mass Spectrometry Data jmzIdentML API: A Java interface to the mzIdentML standard for peptide and protein identification data Open source libraries and frameworks for mass spectrometry based proteomics: a developer's perspective

P2860

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P2860

ProteoWizard: open source software for rapid proteomics tools development.

http://www.wikidata.org/entity/Q33349681

description

2008 nî lūn-bûn

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2008 թուականի Յուլիսին հրատարակուած գիտական յօդուած

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2008 թվականի հուլիսին հրատարակված գիտական հոդված

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2008年の論文

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2008年論文

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2008年論文

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2008年論文

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2008年論文

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2008年論文

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ProteoWizard: open source software for rapid proteomics tools development.

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Darren Kessner

http://www.w3.org/2001/XMLSchema#string

David Agus

http://www.w3.org/2001/XMLSchema#string

Matt Chambers

http://www.w3.org/2001/XMLSchema#string

Parag Mallick

http://www.w3.org/2001/XMLSchema#string

Robert Burke

http://www.w3.org/2001/XMLSchema#string

P2860

Five years of progress in the Standardization of Proteomics Data 4th Annual Spring Workshop of the HUPO-Proteomics Standards Initiative April 23-25, 2007 Ecole Nationale Supérieure (ENS), Lyon, France

A common open representation of mass spectrometry data and its application to proteomics research

A uniform proteomics MS/MS analysis platform utilizing open XML file formats

Computational Proteomics Analysis System (CPAS): an extensible, open-source analytic system for evaluating and publishing proteomic data and high throughput biological experiments.

TOPP--the OpenMS proteomics pipeline.

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2534-2536

http://www.w3.org/2001/XMLSchema#string

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scholarly article

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10.1093/BIOINFORMATICS/BTN323

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21

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24

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18606607

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open-source software

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2732273

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