Genome-scale constraint-based modeling of Geobacter metallireducens - Test2 - elhamkhani - TriplyDB

Genome-scale constraint-based modeling of Geobacter metallireducens

Genome-scale constraint-based modeling of Geobacter metallireducens

http://www.wikidata.org/entity/Q33403641

about

Genome-scale reconstruction of metabolic network for a halophilic extremophile, Chromohalobacter salexigens DSM 3043 The genome of Geobacter bemidjiensis, exemplar for the subsurface clade of Geobacter species that predominate in Fe(III)-reducing subsurface environments Metabolic response of Geobacter sulfurreducens towards electron donor/acceptor variation Constraint-based model of Shewanella oneidensis MR-1 metabolism: a tool for data analysis and hypothesis generation Genome-scale modeling of light-driven reductant partitioning and carbon fluxes in diazotrophic unicellular cyanobacterium Cyanothece sp. ATCC 51142 Identification of functional differences in metabolic networks using comparative genomics and constraint-based models Constraint-based modeling of carbon fixation and the energetics of electron transfer in Geobacter metallireducens Structure, function, and mechanism of the nickel metalloenzymes, CO dehydrogenase, and acetyl-CoA synthase Applications of genome-scale metabolic reconstructions.Evaluation of a genome-scale in silico metabolic model for Geobacter metallireducens by using proteomic data from a field biostimulation experiment.Characterization of proton production and consumption associated with microbial metabolism.SSER: Species specific essential reactions database.Constraint-based modeling analysis of the metabolism of two Pelobacter species.Analysis of enhanced current-generating mechanism of Geobacter sulfurreducens strain via model-driven metabolism simulation.Rapid construction of metabolic models for a family of Cyanobacteria using a multiple source annotation workflow Accomplishments in genome-scale in silico modeling for industrial and medical biotechnology Futile cycling increases sensitivity toward oxidative stress in Escherichia coli.Using the reconstructed genome-scale human metabolic network to study physiology and pathology Expanding the Diet for DIET: Electron Donors Supporting Direct Interspecies Electron Transfer (DIET) in Defined Co-Cultures.The current state of microbial proteomics: where we are and where we want to go.Genome-scale metabolic model in guiding metabolic engineering of microbial improvement.Systems modeling approaches for microbial community studies: from metagenomics to inference of the community structure.Model-driven elucidation of the inherent capacity of Geobacter sulfurreducens for electricity generation.Genome-scale dynamic modeling of the competition between Rhodoferax and Geobacter in anoxic subsurface environments.Characterization and modelling of interspecies electron transfer mechanisms and microbial community dynamics of a syntrophic association.Robust design of microbial strains.Metabolic versatility of toluene-degrading, iron-reducing bacteria in tidal flat sediment, characterized by stable isotope probing-based metagenomic analysis.Systems Biology Approach to Bioremediation of Nitroaromatics: Constraint-Based Analysis of 2,4,6-Trinitrotoluene Biotransformation by Escherichia coli.The design of long-term effective uranium bioremediation strategy using a community metabolic model.Structural and dynamical analysis of biological networks.Genomic insights into the metabolic potential of the polycyclic aromatic hydrocarbon degrading sulfate-reducing Deltaproteobacterium N47.Extremophilic Microfactories: Applications in Metal and Radionuclide Bioremediation.

P2860

Q21202780-A396D7BF-7A87-4A48-8FE9-911516DF43DC Q21267218-154CED62-0EDB-4BFD-A12C-73EB16D344DA Q27497203-67C88C6F-B244-4594-8564-E0D7639B8906 Q28474659-17E577DB-1AF0-4C51-91B3-97DDA36079A4 Q28482400-9A99C6E5-C575-4A4D-B247-54F8E2FA9DE3 Q28483888-23978370-F484-45FA-BAEA-A653A72C1458 Q28538200-D8A82AD3-FFC7-44FE-BC9D-21FEA159F355 Q28658239-5269EF47-7DF5-4FAC-870F-84559AD693EF Q29031028-9C657B09-41F8-4F7E-BC38-698600375146 Q30572301-09596F46-3CAA-48FC-95DB-CE2C9A60F1C8 Q33525406-4E9F3B51-6E8B-4A09-B038-9320C7D51A59 Q33576970-9408D431-6236-411F-9EA1-10F1BD588D26 Q33779601-E7E662EC-19A8-4F0E-BDE1-66481284D374 Q34994439-65DF607F-AF3B-4557-AB29-21C2F5A6DF33 Q35076290-E81D96D5-25ED-4380-8427-0EA21ADD52F4 Q35178614-AACB2C5E-358F-47F2-8663-8F220C258135 Q35602663-6AB05B01-E31F-4004-8266-688C7C6DFF12 Q35624874-3B5E45DE-A94D-4B7A-94F9-754A78AD0FDA Q36634131-72AC2223-B3B3-403B-867C-6B7531393610 Q37975973-424ED62D-7D89-422D-8131-FAF7F30EDED8 Q38063161-3ADEAF70-A35F-4E00-AF5A-1CD22DEF4B73 Q41102241-42C87400-C9DA-4345-B905-72563B9794DD Q41591729-5468A19C-DA72-4F74-9E73-B72FD556A21C Q42743118-FA7435F6-D0D6-412B-A6E2-0FF510319F45 Q44156854-C368B872-454F-4827-BB92-D601A6C85A83 Q45747916-C9C21A96-ECDA-45A7-98D8-D9E44D594FCA Q46983775-8D53F893-7DF2-4836-BC8D-DFB6263DA0A2 Q47798093-8B45ACDB-8806-43B3-8907-5C6F2A92899F Q47891637-DBF09196-1675-41C9-A274-602B2F5FC8BA Q51331161-DB59B644-A27F-4DB5-8B7A-DDA57E45C3B6 Q51611591-BC02C36E-EF29-4828-9481-82FD5CCC0452 Q55307214-7C92C614-24FD-4A2C-B9E4-E709F0835CC8

P2860

Genome-scale constraint-based modeling of Geobacter metallireducens

http://www.wikidata.org/entity/Q33403641

description

2009 nî lūn-bûn

@nan

2009 թուականի Յունուարին հրատարակուած գիտական յօդուած

@hyw

2009 թվականի հունվարին հրատարակված գիտական հոդված

@hy

2009年の論文

@ja

2009年論文

@yue

2009年論文

@zh-hant

2009年論文

@zh-hk

2009年論文

@zh-mo

2009年論文

@zh-tw

2009年论文

@wuu

name

Genome-scale constraint-based modeling of Geobacter metallireducens

@ast

Genome-scale constraint-based modeling of Geobacter metallireducens

@en

type

label

Genome-scale constraint-based modeling of Geobacter metallireducens

@ast

Genome-scale constraint-based modeling of Geobacter metallireducens

@en

prefLabel

Genome-scale constraint-based modeling of Geobacter metallireducens

@ast

Genome-scale constraint-based modeling of Geobacter metallireducens

@en

P1433

Q33403641-03B50B53-D947-472A-9143-62F308BA0C9C

P1476

Q33403641-4F7671A5-72D1-4B34-B2EE-E0A47D8F3679

P2093

Q33403641-127F1D2B-8D61-4391-B4AA-C70860735F16

Q33403641-1CEFB3A8-7BB4-43AC-B5D2-840B7089419A

Q33403641-9288B179-CA81-4330-91F1-DFA6F98D5D81

Q33403641-B31E510D-74E4-464D-8A5D-53CCD1AD1A53

Q33403641-B76644A0-D51E-4CA1-92A1-AF6A2259ADF7

Q33403641-C7AC14A1-5FCE-4DA0-92F3-35D617C4AB73

Q33403641-E0092E0C-BFA6-4363-A777-647F259888D1

P2860

Q33403641-0295CCB7-81F5-44AF-8D6E-C4186F81C856

Q33403641-05527449-2C5A-40B6-8312-0F674FDC1105

Q33403641-0E199701-C0DD-440F-A235-DFB21E56EA47

Q33403641-19566E0B-8B96-4415-96F8-5D195365F817

Q33403641-1A9597B5-8BB0-4674-AF82-A48B0ABC2E5A

Q33403641-27894257-B284-4E65-B8AB-C59FF7F0F09E

Q33403641-2A60D186-F52B-44F9-9F45-A82DFA6EDA97

Q33403641-2F1F9B97-8CD9-43D2-9ADF-0B140DD49D27

Q33403641-41951986-5A39-47BA-A07B-350E1AC378EC

Q33403641-43E46135-8892-4248-82B6-DFB15F608410

P2888

Q33403641-711C9D04-2F22-4D62-95F5-E4AA2A8CAF36

P304

Q33403641-F15BD713-D95A-4EED-A8D4-6DBB0AD58C97

P31

Q33403641-3AC8D3AF-1BF2-40C2-89B4-71162FD2431B

P356

Q33403641-118D35F1-D60A-4734-A609-B19EC23B3289

P478

Q33403641-110EC2F0-FB28-49A3-867B-76426E9B3224

P50

Q33403641-10D3A312-E03F-4D38-9518-B85F4A7DCC0E

Q33403641-D40D7C2C-2386-4B6E-AF63-914477B5CA45

P577

Q33403641-A487D1B6-9D8E-47C1-BFFD-55D899DFC50F

P5875

Q33403641-57515E5F-A866-44B2-BCE3-8E94EC36CDBF

P6179

Q33403641-91E457CB-F7BD-4DED-BCA6-2D19974AB078

P698

Q33403641-6B007A9A-D736-48B7-BE91-BD3841D5016A

P932

Q33403641-23BCB698-C416-4D3B-8240-9E3689348538

P356

P1433

BMC Systems Biology

P1476

Genome-scale constraint-based modeling of Geobacter metallireducens

@en

P2093

Bahareh Sayyar

http://www.w3.org/2001/XMLSchema#string

Christophe H Schilling

http://www.w3.org/2001/XMLSchema#string

Iman Famili

http://www.w3.org/2001/XMLSchema#string

Jun Sun

http://www.w3.org/2001/XMLSchema#string

Priti Pharkya

http://www.w3.org/2001/XMLSchema#string

Radhakrishnan Mahadevan

http://www.w3.org/2001/XMLSchema#string

Tom R Fahland

http://www.w3.org/2001/XMLSchema#string

P2860

An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR)

Electricity production by Geobacter sulfurreducens attached to electrodes

Geobacter sulfurreducens sp. nov., a hydrogen- and acetate-oxidizing dissimilatory metal-reducing microorganism

The Escherichia coli MG1655 in silico metabolic genotype: its definition, characteristics, and capabilities

Genome-scale reconstruction of metabolic network in Bacillus subtilis based on high-throughput phenotyping and gene essentiality data

Direct and Fe(II)-mediated reduction of technetium by Fe(III)-reducing bacteria

Extracellular electron transfer via microbial nanowires

Vanadium respiration by Geobacter metallireducens: novel strategy for in situ removal of vanadium from groundwater

A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and thermodynamic information

Systematic evaluation of objective functions for predicting intracellular fluxes in Escherichia coli

P2888

P304

15

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P356

10.1186/1752-0509-3-15

http://www.w3.org/2001/XMLSchema#string

P478

3

http://www.w3.org/2001/XMLSchema#string

P50

Derek R. Lovley

Jessica E Butler

P577

2009-01-28T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

23956216

http://www.w3.org/2001/XMLSchema#string

P6179

1024079562

http://www.w3.org/2001/XMLSchema#string

P698

19175927

http://www.w3.org/2001/XMLSchema#string

P932

2640342

http://www.w3.org/2001/XMLSchema#string