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Control of rRNA synthesis in Escherichia coli: a systems biology approach.

Control of rRNA synthesis in Escherichia coli: a systems biology approach.

http://www.wikidata.org/entity/Q33559589

about

Reverse transcription of 16S rRNA to monitor ribosome-synthesizing bacterial populations in the environment The genomic pattern of tDNA operon expression in E. coli.The spatial biology of transcription and translation in rapidly growing Escherichia coli Direct binding targets of the stringent response alarmone (p)ppGpp Robust reconstruction of gene expression profiles from reporter gene data using linear inversion.Ribosome biogenesis and the translation process in Escherichia coli Inference of quantitative models of bacterial promoters from time-series reporter gene data Translation initiation region sequence preferences in Escherichia coli.Near-critical behavior of aminoacyl-tRNA pools in E. coli at rate-limiting supply of amino acids.Characterization of nucleotide pools as a function of physiological state in Escherichia coli.A coarse-grained biophysical model of E. coli and its application to perturbation of the rRNA operon copy number.Genome-wide screening of genes whose enhanced expression affects glycogen accumulation in Escherichia coli.Nonoptimal microbial response to antibiotics underlies suppressive drug interactions.Regulation of glycogen metabolism in yeast and bacteria.How molecular competition influences fluxes in gene expression networks.Distinct and contrasting transcription initiation patterns at Mycobacterium tuberculosis promoters.CRISPR transcriptional repression devices and layered circuits in mammalian cells The significance of translation regulation in the stress response.Downregulation of the Escherichia coli guaB promoter by upstream-bound cyclic AMP receptor protein.Global analysis of Salmonella alternative sigma factor E on protein translation.Regulation of 6S RNA by pRNA synthesis is required for efficient recovery from stationary phase in E. coli and B. subtilis Co-ordinated regulation of the extracytoplasmic stress factor, sigmaE, with other Escherichia coli sigma factors by (p)ppGpp and DksA may be achieved by specific regulation of individual holoenzymes.Strength and Regulation of Seven rRNA Promoters in Escherichia coli.Dynamical Allocation of Cellular Resources as an Optimal Control Problem: Novel Insights into Microbial Growth Strategies.A Minimalistic Resource Allocation Model to Explain Ubiquitous Increase in Protein Expression with Growth Rate.Enhanced secretion of recombinant proteins via signal recognition particle (SRP)-dependent secretion pathway by deletion of rrsE in Escherichia coli.Metabolic engineering in the -omics era: elucidating and modulating regulatory networks.Differential Regulation of rRNA and tRNA Transcription from the rRNA-tRNA Composite Operon in Escherichia coli.Few regulatory metabolites coordinate expression of central metabolic genes in Escherichia coli.Growth rate regulation in Escherichia coli.Markerless Escherichia coli rrn Deletion Strains for Genetic Determination of Ribosomal Binding Sites.Transcription profiling of the stringent response in Escherichia coli.SutA is a bacterial transcription factor expressed during slow growth in Pseudomonas aeruginosa Deletion of AS87_03730 gene changed the bacterial virulence and gene expression of Riemerella anatipestifer.Involvement of cyclic AMP receptor protein in regulation of the rmf gene encoding the ribosome modulation factor in Escherichia coli Growth-rate-dependent partitioning of RNA polymerases in bacteria.Varying rate of RNA chain elongation during rrn transcription in Escherichia coli Molecular crowding limits translation and cell growth.Inhibition of bacterial ribosome assembly: a suitable drug target?Recombination and annealing pathways compete for substrates in making rrn duplications in Salmonella enterica.

P2860

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P2860

Control of rRNA synthesis in Escherichia coli: a systems biology approach.

http://www.wikidata.org/entity/Q33559589

description

2004 nî lūn-bûn

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2004 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած

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2004 թվականի դեկտեմբերին հրատարակված գիտական հոդված

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2004年の論文

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2004年論文

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2004年論文

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2004年論文

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2004年論文

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2004年論文

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2004年论文

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name

Control of rRNA synthesis in Escherichia coli: a systems biology approach.

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Control of rRNA synthesis in Escherichia coli: a systems biology approach.

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Control of rRNA synthesis in Escherichia coli: a systems biology approach.

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label

Control of rRNA synthesis in Escherichia coli: a systems biology approach.

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Control of rRNA synthesis in Escherichia coli: a systems biology approach.

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Control of rRNA synthesis in Escherichia coli: a systems biology approach.

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Control of rRNA synthesis in Escherichia coli: a systems biology approach.

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Control of rRNA synthesis in Escherichia coli: a systems biology approach.

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Control of rRNA synthesis in Escherichia coli: a systems biology approach.

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MMBR.68.4.639-668.2004

P1433

Microbiology and Molecular Biology Reviews

P1476

Control of rRNA synthesis in Escherichia coli: a systems biology approach.

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P2093

Hans Bremer

http://www.w3.org/2001/XMLSchema#string

Mans Ehrenberg

http://www.w3.org/2001/XMLSchema#string

Patrick P Dennis

http://www.w3.org/2001/XMLSchema#string

P2860

Stringent response of Bacillus stearothermophilus: evidence for the existence of two distinct guanosine 3',5'-polyphosphate synthetases

The guanosine 3',5'-bis(diphosphate) (ppGpp) cycle. Comparison of synthesis and degradation of guanosine 3',5'-bis(diphosphate) in various bacterial systems

Guanosine 5'-triphosphate, 3'-diphosphate 5'-phosphohydrolase. Purification and substrate specificity

Binding of the transcription effector ppGpp to Escherichia coli RNA polymerase is allosteric, modular, and occurs near the N terminus of the beta'-subunit.

Mechanism of regulation of transcription initiation by ppGpp. I. Effects of ppGpp on transcription initiation in vivo and in vitro.

Mechanism of regulation of transcription initiation by ppGpp. II. Models for positive control based on properties of RNAP mutants and competition for RNAP.

Guanosine 3'-diphosphate 5'-diphosphate is not required for growth rate-dependent control of rRNA synthesis in Escherichia coli

Retroregulation of the synthesis of ribosomal proteins L14 and L24 by feedback repressor S8 in Escherichia coli.

Comparison of the expression of the seven ribosomal RNA operons in Escherichia coli.

The feedback response of Escherichia coli rRNA synthesis is not identical to the mechanism of growth rate-dependent control.

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639-668

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10.1128/MMBR.68.4.639-668.2004

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4

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68

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2004-12-01T00:00:00Z

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15590778

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Escherichia coli

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539008

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