Integration of metabolic databases for the reconstruction of genome-scale metabolic networks. - Test2 - elhamkhani - TriplyDB

Integration of metabolic databases for the reconstruction of genome-scale metabolic networks.

Integration of metabolic databases for the reconstruction of genome-scale metabolic networks.

http://www.wikidata.org/entity/Q33659541

about

Genome-scale reconstruction of metabolic network for a halophilic extremophile, Chromohalobacter salexigens DSM 3043 Big Data Analytics in Healthcare.Systematic integration of experimental data and models in systems biology Using bioconductor package BiGGR for metabolic flux estimation based on gene expression changes in brain Patterns of metabolite changes identified from large-scale gene perturbations in Arabidopsis using a genome-scale metabolic network Path2Models: large-scale generation of computational models from biochemical pathway maps Integrated network analysis and effective tools in plant systems biology.Towards improved genome-scale metabolic network reconstructions: unification, transcript specificity and beyond Topological analysis and interactive visualization of biological networks and protein structures.Error Analysis and Propagation in Metabolomics Data Analysis.Critical assessment of human metabolic pathway databases: a stepping stone for future integration.The metabolic blueprint of Phaeodactylum tricornutum reveals a eukaryotic Entner-Doudoroff glycolytic pathway.MetRxn: a knowledgebase of metabolites and reactions spanning metabolic models and databases.Systematic comparison of C3 and C4 plants based on metabolic network analysis.Consensus and conflict cards for metabolic pathway databases.A systematic simulation of the effect of salicylic acid on sphingolipid metabolism.Rhea--a manually curated resource of biochemical reactions Application of Top-Down and Bottom-up Systems Approaches in Ruminant Physiology and Metabolism.Efficient Reconstruction of Predictive Consensus Metabolic Network Models.Cell scale host-pathogen modeling: another branch in the evolution of constraint-based methods.Recent progress in the development of metabolome databases for plant systems biology.Reconciliation of metabolites and biochemical reactions for metabolic networks.Flux-balance modeling of plant metabolism.Knowledge representation in metabolic pathway databases.Nitrogen-use efficiency in maize (Zea mays L.): from 'omics' studies to metabolic modelling.BKM-react, an integrated biochemical reaction database redGEM: Systematic reduction and analysis of genome-scale metabolic reconstructions for development of consistent core metabolic models.Modeling the Metabolism of Arabidopsis thaliana: Application of Network Decomposition and Network Reduction in the Context of Petri Nets Algorithm for the Construction of a Global Enzymatic Network to be Used for Gene Network Reconstruction.Flux Balance Analysis of Plant Metabolism: The Effect of Biomass Composition and Model Structure on Model Predictions.A protocol for the subcellular fractionation of Saccharomyces cerevisiae using nitrogen cavitation and density gradient centrifugation.Environment and bladder cancer: molecular analysis by interaction networks.Modelling central metabolic fluxes by constraint-based optimization reveals metabolic reprogramming of developing Solanum lycopersicum (tomato) fruit.An extended bioreaction database that significantly improves reconstruction and analysis of genome-scale metabolic networks.Biological function through network topology: a survey of the human diseasome.Integrated Host-Pathogen Metabolic Reconstructions.An interaction network approach to study the correlation between endocrine disrupting chemicals and breast cancer.Metabolic network reconstruction and flux variability analysis of storage synthesis in developing oilseed rape (Brassica napus L.) embryos.Identifying a panel of genes/proteins/miRNAs modulated by arsenicals in bladder, prostate, kidney cancers

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Integration of metabolic databases for the reconstruction of genome-scale metabolic networks.

http://www.wikidata.org/entity/Q33659541

description

2010 nî lūn-bûn

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2010 թուականի Օգոստոսին հրատարակուած գիտական յօդուած

@hyw

2010 թվականի օգոստոսին հրատարակված գիտական հոդված

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2010年の論文

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2010年論文

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2010年論文

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2010年論文

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2010年論文

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2010年論文

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2010年论文

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Integration of metabolic datab ...... nome-scale metabolic networks.

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Integration of metabolic datab ...... nome-scale metabolic networks.

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Integration of metabolic datab ...... nome-scale metabolic networks.

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Albert Gevorgyan

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Gino Baart

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Karin Radrich

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Paul Dobson

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A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology

An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR)

Cytoscape: a software environment for integrated models of biomolecular interaction networks

Genome-scale reconstruction of the Saccharomyces cerevisiae metabolic network

A protocol for generating a high-quality genome-scale metabolic reconstruction

Glucosinolate metabolites required for an Arabidopsis innate immune response

KEGG for linking genomes to life and the environment

ChEBI: a database and ontology for chemical entities of biological interest

AraGEM, a genome-scale reconstruction of the primary metabolic network in Arabidopsis

The Escherichia coli MG1655 in silico metabolic genotype: its definition, characteristics, and capabilities

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