Comparative study between transcriptionally- and translationally-acting adenine riboswitches reveals key differences in riboswitch regulatory mechanisms - Test2 - elhamkhani - TriplyDB

Comparative study between transcriptionally- and translationally-acting adenine riboswitches reveals key differences in riboswitch regulatory mechanisms

Comparative study between transcriptionally- and translationally-acting adenine riboswitches reveals key differences in riboswitch regulatory mechanisms

http://www.wikidata.org/entity/Q33809385

about

A global sampling approach to designing and reengineering RNA secondary structures Molecular recognition and function of riboswitches A decade of riboswitches Insights into the Regulatory Landscape of the Lysine Riboswitch Nucleotides Adjacent to the Ligand-Binding Pocket are Linked to Activity Tuning in the Purine Riboswitch A Disconnect between High-Affinity Binding and Efficient Regulation by Antifolates and Purines in the Tetrahydrofolate Riboswitch Metabolite recognition principles and molecular mechanisms underlying riboswitch function Riboswitches in eubacteria sense the second messenger c-di-AMP Evolutionary evidence for alternative structure in RNA sequence co-variation Simultaneous folding of alternative RNA structures with mutual constraints: an application to next-generation sequencing-based RNA structure probing.The purine riboswitch as a model system for exploring RNA biology and chemistry Dynamic energy landscapes of riboswitches help interpret conformational rearrangements and function.A two-dimensional mutate-and-map strategy for non-coding RNA structure.Evaluating our ability to predict the structural disruption of RNA by SNPs.Ligand binding by the tandem glycine riboswitch depends on aptamer dimerization but not double ligand occupancy Cyclic di-GMP riboswitch-regulated type IV pili contribute to aggregation of Clostridium difficile.Structure-guided mutational analysis of gene regulation by the Bacillus subtilis pbuE adenine-responsive riboswitch in a cellular context.Constitutive regulatory activity of an evolutionarily excluded riboswitch variant.A family of synthetic riboswitches adopts a kinetic trapping mechanism.Single-molecule force spectroscopy of the add adenine riboswitch relates folding to regulatory mechanism A kissing loop is important for btuB riboswitch ligand sensing and regulatory control.Transcriptional pausing coordinates folding of the aptamer domain and the expression platform of a riboswitch.The primary σ factor in Escherichia coli can access the transcription elongation complex from solution in vivo.A Highly Coupled Network of Tertiary Interactions in the SAM-I Riboswitch and Their Role in Regulatory Tuning.Dual-acting riboswitch control of translation initiation and mRNA decay The expression platform and the aptamer: cooperativity between Mg2+ and ligand in the SAM-I riboswitch.Fluorescence monitoring of riboswitch transcription regulation using a dual molecular beacon assay Single-molecule studies of the lysine riboswitch reveal effector-dependent conformational dynamics of the aptamer domain.A Two-Way Street: Regulatory Interplay between RNA Polymerase and Nascent RNA Structure.Modularity of select riboswitch expression platforms enables facile engineering of novel genetic regulatory devices.Structure and mechanism of purine-binding riboswitches.Riboswitch control of induction of aminoglycoside resistance acetyl and adenyl-transferases Engineering modular 'ON' RNA switches using biological components New insights into riboswitch regulation mechanisms.Themes and variations in riboswitch structure and function.Single-molecule studies of riboswitch folding.Role of lysine binding residues in the global folding of the lysC riboswitch.Ligand-induced stabilization of the aptamer terminal helix in the add adenine riboswitch.An integrated perspective on RNA aptamer ligand-recognition models: clearing muddy waters.Conformational Dynamics of mRNA in Gene Expression as New Pharmaceutical Target.

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Comparative study between transcriptionally- and translationally-acting adenine riboswitches reveals key differences in riboswitch regulatory mechanisms

http://www.wikidata.org/entity/Q33809385

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2011 nî lūn-bûn

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2011 թուականի Յունուարին հրատարակուած գիտական յօդուած

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2011年の論文

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Comparative study between tran ...... boswitch regulatory mechanisms

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Benoit Heppell

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Daniel A Lafontaine

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Eric Massé

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Guillaume Desnoyers

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Jean-François Lemay

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Laurène Bastet

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Patrick St-Pierre

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Simon Blouin

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P2860

A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coli

An mRNA structure that controls gene expression by binding FMN

2-Aminopurine fluorescence quenching and lifetimes: role of base stacking

Ligand recognition determinants of guanine riboswitches

Regulatory RNAs in bacteria

Inducible gene expression from the plastid genome by a synthetic riboswitch

Structural basis of ligand binding by a c-di-GMP riboswitch

Translational induction of heat shock transcription factor sigma32: evidence for a built-in RNA thermosensor

Recognition of the bacterial second messenger cyclic diguanylate by its cognate riboswitch

An mRNA structure in bacteria that controls gene expression by binding lysine

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1

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21283784

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3024265

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