Accommodation of aminoacyl-tRNA into the ribosome involves reversible excursions along multiple pathways. - Test2 - elhamkhani - TriplyDB

Accommodation of aminoacyl-tRNA into the ribosome involves reversible excursions along multiple pathways.

Accommodation of aminoacyl-tRNA into the ribosome involves reversible excursions along multiple pathways.

http://www.wikidata.org/entity/Q33867466

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Functional Importance of Mobile Ribosomal Proteins MMB-GUI: a fast morphing method demonstrates a possible ribosomal tRNA translocation trajectory.The origin of minus-end directionality and mechanochemistry of Ncd motors Steric interactions lead to collective tilting motion in the ribosome during mRNA-tRNA translocation Head swivel on the ribosome facilitates translocation by means of intra-subunit tRNA hybrid sites Allostery in the ferredoxin protein motif does not involve a conformational switch Structural insights into cognate versus near-cognate discrimination during decoding.Allosteric control in a metalloprotein dramatically alters function.Connecting the kinetics and energy landscape of tRNA translocation on the ribosome Deducing the kinetics of protein synthesis in vivo from the transition rates measured in vitro Evolutionary optimization of speed and accuracy of decoding on the ribosome How EF-Tu can contribute to efficient proofreading of aa-tRNA by the ribosome The dominant folding route minimizes backbone distortion in SH3.Substrate-specific reorganization of the conformational ensemble of CSK implicates novel modes of kinase function Interplay of the bacterial ribosomal A-site, S12 protein mutations and paromomycin binding: a molecular dynamics study.Hierarchical domain-motion analysis of conformational changes in sarcoplasmic reticulum Ca²⁺-ATPase.Examinations of tRNA Range of Motion Using Simulations of Cryo-EM Microscopy and X-Ray Data.Native structure-based modeling and simulation of biomolecular systems per mouse click.Structure-based simulations reveal concerted dynamics of GPCR activation Tracking fluctuation hotspots on the yeast ribosome through the elongation cycle The ribosome's energy landscape: Recent insights from computation Hierarchy of RNA functional dynamics.SMOG@ctbp: simplified deployment of structure-based models in GROMACS Conformational sampling of aminoacyl-tRNA during selection on the bacterial ribosome.Consensus among flexible fitting approaches improves the interpretation of cryo-EM data.Protein dynamics via computational microscope.A-site residues move independently from P-site residues in all-atom molecular dynamics simulations of the 70S bacterial ribosome.Connecting energy landscapes with experimental rates for aminoacyl-tRNA accommodation in the ribosome.The future of molecular dynamics simulations in drug discovery.A computational investigation on the connection between dynamics properties of ribosomal proteins and ribosome assembly Labeled EF-Tus for rapid kinetic studies of pretranslocation complex formation A molecular clamp ensures allosteric coordination of peptidyltransfer and ligand binding to the ribosomal A-site Avilamycin and evernimicin induce structural changes in rProteins uL16 and CTC that enhance the inhibition of A-site tRNA binding Phenotypic interactions among mutations in a Thermus thermophilus 16S rRNA gene detected with genetic selections and experimental evolution.Role of large thermal fluctuations and magnesium ions in t-RNA selectivity of the ribosome.Capturing transition paths and transition states for conformational rearrangements in the ribosome.Mutations of highly conserved bases in the peptidyltransferase center induce compensatory rearrangements in yeast ribosomes.LipidWrapper: an algorithm for generating large-scale membrane models of arbitrary geometry Excited states of ribosome translocation revealed through integrative molecular modeling.Exploring the balance between folding and functional dynamics in proteins and RNA.

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P2860

Accommodation of aminoacyl-tRNA into the ribosome involves reversible excursions along multiple pathways.

http://www.wikidata.org/entity/Q33867466

description

2010 nî lūn-bûn

@nan

2010 թուականի Ապրիլին հրատարակուած գիտական յօդուած

@hyw

2010 թվականի ապրիլին հրատարակված գիտական հոդված

@hy

2010年の論文

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2010年論文

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2010年論文

@zh-hant

2010年論文

@zh-hk

2010年論文

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2010年論文

@zh-tw

2010年论文

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name

Accommodation of aminoacyl-tRN ...... sions along multiple pathways.

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Accommodation of aminoacyl-tRN ...... sions along multiple pathways.

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type

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Accommodation of aminoacyl-tRN ...... sions along multiple pathways.

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Accommodation of aminoacyl-tRN ...... sions along multiple pathways.

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Accommodation of aminoacyl-tRN ...... sions along multiple pathways.

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Accommodation of aminoacyl-tRN ...... sions along multiple pathways.

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Accommodation of aminoacyl-tRN ...... sions along multiple pathways.

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Karissa Y Sanbonmatsu

http://www.w3.org/2001/XMLSchema#string

Peter Geggier

http://www.w3.org/2001/XMLSchema#string

Roger B Altman

http://www.w3.org/2001/XMLSchema#string

Scott C Blanchard

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P2860

Insights into substrate stabilization from snapshots of the peptidyl transferase center of the intact 70S ribosome.

The crystal structure of yeast phenylalanine tRNA at 1.93 A resolution: a classic structure revisited.

Structure of functionally activated small ribosomal subunit at 3.3 angstroms resolution

Crystal structure of the ribosome at 5.5 A resolution

Crystal structure of a translation termination complex formed with release factor RF2

Ribosome-induced changes in elongation factor Tu conformation control GTP hydrolysis

GTPase activation of elongation factor EF-Tu by the ribosome during decoding.

Formation of the First Peptide Bond: The Structure of EF-P Bound to the 70S Ribosome

Structures of the ribosome in intermediate states of ratcheting

The Crystal Structure of the Ribosome Bound to EF-Tu and Aminoacyl-tRNA

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1196-1204

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scholarly article

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10.1261/RNA.2035410

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6

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16

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2010-04-28T00:00:00Z

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20427512

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