HiChIP: efficient and sensitive analysis of protein-directed genome architecture. - Test2 - elhamkhani - TriplyDB

HiChIP: efficient and sensitive analysis of protein-directed genome architecture.

HiChIP: efficient and sensitive analysis of protein-directed genome architecture.

http://www.wikidata.org/entity/Q33883075

about

How best to identify chromosomal interactions: a comparison of approaches.HiCRep: assessing the reproducibility of Hi-C data using a stratum- adjusted correlation coefficient.Targeted Degradation of CTCF Decouples Local Insulation of Chromosome Domains from Genomic Compartmentalization.Genomics of Islet (Dys)function and Type 2 Diabetes.Topologically associated domains: a successful scaffold for the evolution of gene regulation in animals.Discovery of stimulation-responsive immune enhancers with CRISPR activation.Structural aspects of the inactive X chromosome Three-dimensional genome architecture and emerging technologies: looping in disease.Enhancer connectome in primary human cells identifies target genes of disease-associated DNA elements.Mapping of long-range chromatin interactions by proximity ligation-assisted ChIP-seq.diffloop: a computational framework for identifying and analyzing differential DNA loops from sequencing data.Chromatin interaction networks revealed unique connectivity patterns of broad H3K4me3 domains and super enhancers in 3D chromatin.The Three-Dimensional Organization of Mammalian Genomes.BL-Hi-C is an efficient and sensitive approach for capturing structural and regulatory chromatin interactions.YY1 Is a Structural Regulator of Enhancer-Promoter Loops.Enhancers looping to target genes.Static and Dynamic DNA Loops form AP-1-Bound Activation Hubs during Macrophage Development.Evolutionarily Conserved Principles Predict 3D Chromatin Organization.Technical Review: A Hitchhiker's Guide to Chromosome Conformation Capture.Using DNase Hi-C techniques to map global and local three-dimensional genome architecture at high resolution.Juicebox.js Provides a Cloud-Based Visualization System for Hi-C Data.Dissecting super-enhancer hierarchy based on chromatin interactions.Characterization of Coding/Noncoding Variants for SHROOM3 in Patients with CKD.Epigenomics: Technologies and Applications.DNA Supercoiling, Topoisomerases, and Cohesin: Partners in Regulating Chromatin Architecture?Unravelling the molecular basis for regulatory T-cell plasticity and loss of function in disease.Chromatin Architectural Changes during Cellular Senescence and Aging.OCEAN-C: mapping hubs of open chromatin interactions across the genome reveals gene regulatory networks.Computational prediction of CTCF/cohesin-based intra-TAD loops that insulate chromatin contacts and gene expression in mouse liver.3C and 3C-based techniques: the powerful tools for spatial genome organization deciphering.Transcriptional Dysregulation of MYC Reveals Common Enhancer-Docking Mechanism.From association to mechanism in complex disease genetics: the role of the 3D genome Enhancer histone-QTLs are enriched on autoimmune risk haplotypes and influence gene expression within chromatin networks Predicting CTCF-mediated chromatin interactions by integrating genomic and epigenomic features GenomeDISCO: a concordance score for chromosome conformation capture experiments using random walks on contact map graphs Commentary: Nuclear dynamics of the Set1C subunit Spp1 prepares meiotic recombination sites for break formation

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HiChIP: efficient and sensitive analysis of protein-directed genome architecture.

http://www.wikidata.org/entity/Q33883075

description

2016 nî lūn-bûn

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2016 թուականի Սեպտեմբերին հրատարակուած գիտական յօդուած

@hyw

2016 թվականի սեպտեմբերին հրատարակված գիտական հոդված

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2016年の論文

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2016年論文

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2016年論文

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2016年論文

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2016年論文

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2016年論文

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2016年论文

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name

HiChIP: efficient and sensitive analysis of protein-directed genome architecture.

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HiChIP: efficient and sensitive analysis of protein-directed genome architecture.

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HiChIP: efficient and sensitive analysis of protein-directed genome architecture.

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HiChIP: efficient and sensitive analysis of protein-directed genome architecture.

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HiChIP: efficient and sensitive analysis of protein-directed genome architecture.

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HiChIP: efficient and sensitive analysis of protein-directed genome architecture.

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HiChIP: efficient and sensitive analysis of protein-directed genome architecture.

@en

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Adam J Rubin

http://www.w3.org/2001/XMLSchema#string

Chao Dai

http://www.w3.org/2001/XMLSchema#string

Howard Y Chang

http://www.w3.org/2001/XMLSchema#string

Paul A Khavari

http://www.w3.org/2001/XMLSchema#string

P2860

Model-based analysis of ChIP-Seq (MACS)

Mediator and cohesin connect gene expression and chromatin architecture

Comprehensive mapping of long-range interactions reveals folding principles of the human genome

Control of cell identity genes occurs in insulated neighborhoods in mammalian chromosomes

Topological domains in mammalian genomes identified by analysis of chromatin interactions

Statistical confidence estimation for Hi-C data reveals regulatory chromatin contacts

An oestrogen-receptor-α-bound human chromatin interactome

Spatial partitioning of the regulatory landscape of the X-inactivation centre

A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping

HiC-Pro: an optimized and flexible pipeline for Hi-C data processing.

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919-922

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scholarly article

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10.1038/NMETH.3999

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11

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13

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Maxwell R Mumbach

William Greenleaf

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2016-09-19T00:00:00Z

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1012701544

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27643841

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5501173

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