Genome-wide identification of conserved regulatory function in diverged sequences - Test2 - elhamkhani - TriplyDB

Genome-wide identification of conserved regulatory function in diverged sequences

Genome-wide identification of conserved regulatory function in diverged sequences

http://www.wikidata.org/entity/Q33917897

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What does our genome encode?Tbx20 regulates a genetic program essential to adult mouse cardiomyocyte function Phylum-Level Conservation of Regulatory Information in Nematodes despite Extensive Non-coding Sequence Divergence Abnormal dosage of ultraconserved elements is highly disfavored in healthy cells but not cancer cells Pervasive divergence of transcriptional gene regulation in Caenorhabditis nematodes Functional analysis of limb transcriptional enhancers in the mouse Harnessing mobile genetic elements to explore gene regulation QuartetS-DB: a large-scale orthology database for prokaryotes and eukaryotes inferred by evolutionary evidence.A novel model for development, organization, and function of gonadotropes in fish pituitary.Using BAC transgenesis in zebrafish to identify regulatory sequences of the amyloid precursor protein gene in humans.Evidence for deep regulatory similarities in early developmental programs across highly diverged insects De novo prediction of cis-regulatory elements and modules through integrative analysis of a large number of ChIP datasets Parallel evolution of chordate cis-regulatory code for development.Identification and computational analysis of gene regulatory elements.Handling Permutation in Sequence Comparison: Genome-Wide Enhancer Prediction in Vertebrates by a Novel Non-Linear Alignment Scoring Principle.Functionally conserved enhancers with divergent sequences in distant vertebrates.The chromatin fingerprint of gene enhancer elements.Genome-Level Analysis of Selective Constraint without Apparent Sequence Conservation.The mystery of extreme non-coding conservation.Enhancer turnover and conserved regulatory function in vertebrate evolution.Genome-wide analysis of promoters: clustering by alignment and analysis of regular patterns.Identifying Distal cis-acting Gene-Regulatory Sequences by Expressing BACs Functionalized with loxP-Tn10 Transposons in Zebrafish.Deep conservation of cis-regulatory elements in metazoans.Toward understanding the evolution of vertebrate gene regulatory networks: comparative genomics and epigenomic approaches.Comparative analyses of super-enhancers reveal conserved elements in vertebrate genomes.Ever-Changing Landscapes: Transcriptional Enhancers in Development and Evolution.Topologically associated domains: a successful scaffold for the evolution of gene regulation in animals.The epigenomics of schizophrenia, in the mouse.A geometric interpretation for local alignment-free sequence comparison.Computational methods to detect conserved non-genic elements in phylogenetically isolated genomes: application to zebrafish.Decoding plant and animal genome plasticity from differential paleo-evolutionary patterns and processes.Comparative epigenomics in distantly related teleost species identifies conserved cis-regulatory nodes active during the vertebrate phylotypic period Multiple enhancer regions govern the transcription of CCN2 during embryonic development.A screen for deeply conserved non-coding GWAS SNPs uncovers a MIR-9-2 functional mutation associated to retinal vasculature defects in human.Using Zebrafish to Test the Genetic Basis of Human Craniofacial Diseases.Mechanisms of Evolutionary Innovation Point to Genetic Control Logic as the Key Difference Between Prokaryotes and Eukaryotes.

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Genome-wide identification of conserved regulatory function in diverged sequences

http://www.wikidata.org/entity/Q33917897

description

2011 nî lūn-bûn

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2011 թուականի Մայիսին հրատարակուած գիտական յօդուած

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2011 թվականի մայիսին հրատարակված գիտական հոդված

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2011年の論文

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2011年学术文章

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2011年学术文章

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2011年学术文章

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2011年学术文章

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2011年学术文章

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2011年學術文章

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name

Genome-wide identification of conserved regulatory function in diverged sequences

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Genome-wide identification of conserved regulatory function in diverged sequences

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type

label

Genome-wide identification of conserved regulatory function in diverged sequences

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Genome-wide identification of conserved regulatory function in diverged sequences

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prefLabel

Genome-wide identification of conserved regulatory function in diverged sequences

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Genome-wide identification of conserved regulatory function in diverged sequences

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Genome Research

P1476

Genome-wide identification of conserved regulatory function in diverged sequences

@en

P2093

Andrew S McCallion

http://www.w3.org/2001/XMLSchema#string

Ivan Ovcharenko

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Ivy Aneas

http://www.w3.org/2001/XMLSchema#string

Leila Taher

http://www.w3.org/2001/XMLSchema#string

Marcelo A Nobrega

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Samantha Maragh

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Seneca L Bessling

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P2860

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

Highly conserved non-coding sequences are associated with vertebrate development

Functional evolution of a cis-regulatory module

Identification of a Coordinate Regulator of Interleukins 4, 13, and 5 by Cross-Species Sequence Comparisons

Ultraconserved Elements in the Human Genome

Species-specific transcription in mice carrying human chromosome 21

Five-vertebrate ChIP-seq reveals the evolutionary dynamics of transcription factor binding

Initial sequencing and comparative analysis of the mouse genome

Gene ontology: tool for the unification of biology

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes.

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10.1101/GR.119016.110

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7

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21

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David M McGaughey

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51180283

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21628450

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3129256

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