Nonspecifically bound proteins spin while diffusing along DNA. - Test2 - elhamkhani - TriplyDB

Nonspecifically bound proteins spin while diffusing along DNA.

Nonspecifically bound proteins spin while diffusing along DNA.

http://www.wikidata.org/entity/Q33929106

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Accessing DNA damage in chromatin: Preparing the chromatin landscape for base excision repair DNA glycosylases: in DNA repair and beyond The Fpg/Nei family of DNA glycosylases: substrates, structures, and search for damage Retroviral intasomes search for a target DNA by 1D diffusion which rarely results in integration Single-molecule visualization of a formin-capping protein 'decision complex' at the actin filament barbed end Sliding of proteins non-specifically bound to DNA: Brownian dynamics studies with coarse-grained protein and DNA models A Dynamic Search Process Underlies MicroRNA Targeting.Molecular sled is an eleven-amino acid vehicle facilitating biochemical interactions via sliding components along DNA.Structure of Escherichia coli AlkA in Complex with Undamaged DNA Searching for DNA Lesions: Structural Evidence for Lower- and Higher-Affinity DNA Binding Conformations of Human Alkyladenine DNA Glycosylase Duplex interrogation by a direct DNA repair protein in search of base damage Steric Mechanism of Auto-Inhibitory Regulation of Specific and Non-Specific DNA Binding by the ETS Transcriptional Repressor ETV6 Molecular recognition in complexes of TRF proteins with telomeric DNA High-Throughput Universal DNA Curtain Arrays for Single-Molecule Fluorescence Imaging Analysis of a single-stranded DNA-scanning process in which activation-induced deoxycytidine deaminase (AID) deaminates C to U haphazardly and inefficiently to ensure mutational diversity Single-molecule imaging reveals target-search mechanisms during DNA mismatch repair.AID and Apobec3G haphazard deamination and mutational diversity TRF1 and TRF2 use different mechanisms to find telomeric DNA but share a novel mechanism to search for protein partners at telomeres.Visualizing protein movement on DNA at the single-molecule level using DNA curtains Insights into the glycosylase search for damage from single-molecule fluorescence microscopy.Probing the target search of DNA-binding proteins in mammalian cells using TetR as model searcher Transport efficiency of membrane-anchored kinesin-1 motors depends on motor density and diffusivity.Method for the analysis of contribution of sliding and hopping to a facilitated diffusion of DNA-binding protein: Application to in vivo data.Computational models for large-scale simulations of facilitated diffusion Two glycosylase families diffusively scan DNA using a wedge residue to probe for and identify oxidatively damaged bases.On the Possibility of Facilitated Diffusion of Dendrimers Along DNA.Hopping enables a DNA repair glycosylase to search both strands and bypass a bound protein.Metadynamics simulation study on the conformational transformation of HhaI methyltransferase: an induced-fit base-flipping hypothesis Base excision repair: a critical player in many games Microscopic mechanism of DNA damage searching by hOGG1 Biophysical characterization of DNA binding from single molecule force measurements Ultrafast water dynamics at the interface of the polymerase-DNA binding complex Probing the rate-limiting step for intramolecular transfer of a transcription factor between specific sites on the same DNA molecule by (15)Nz-exchange NMR spectroscopy.Direct observation of TALE protein dynamics reveals a two-state search mechanism DNA binding proteins explore multiple local configurations during docking via rapid rebinding.Structure, function and dynamics in adenovirus maturation.Protein-DNA binding in the absence of specific base-pair recognition MutS switches between two fundamentally distinct clamps during mismatch repair.Probing the DNA structural requirements for facilitated diffusion.Rapid search for specific sites on DNA through conformational switch of nonspecifically bound proteins.

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P2860

Nonspecifically bound proteins spin while diffusing along DNA.

http://www.wikidata.org/entity/Q33929106

description

2009 nî lūn-bûn

@nan

2009 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած

@hyw

2009 թվականի նոյեմբերին հրատարակված գիտական հոդված

@hy

2009年の論文

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2009年学术文章

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2009年学术文章

@zh-cn

2009年学术文章

@zh-hans

2009年学术文章

@zh-my

2009年学术文章

@zh-sg

2009年學術文章

@yue

name

Nonspecifically bound proteins spin while diffusing along DNA.

@ast

Nonspecifically bound proteins spin while diffusing along DNA.

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type

label

Nonspecifically bound proteins spin while diffusing along DNA.

@ast

Nonspecifically bound proteins spin while diffusing along DNA.

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prefLabel

Nonspecifically bound proteins spin while diffusing along DNA.

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Nonspecifically bound proteins spin while diffusing along DNA.

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Nature Structural & Molecular Biology

P1476

Nonspecifically bound proteins spin while diffusing along DNA

@en

P2093

Gregory L Verdine

http://www.w3.org/2001/XMLSchema#string

Guobin Luo

http://www.w3.org/2001/XMLSchema#string

S C Kou

http://www.w3.org/2001/XMLSchema#string

Walter F Mangel

http://www.w3.org/2001/XMLSchema#string

X Sunney Xie

http://www.w3.org/2001/XMLSchema#string

P2860

Structural basis for recognition and repair of the endogenous mutagen 8-oxoguanine in DNA

Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution

A base-excision DNA-repair protein finds intrahelical lesion bases by fast sliding in contact with DNA.

RNA polymerase can track a DNA groove during promoter search.

Diffusion in a rough potential

Structure of a repair enzyme interrogating undamaged DNA elucidates recognition of damaged DNA.

Probing transcription factor dynamics at the single-molecule level in a living cell.

Tumor suppressor p53 slides on DNA with low friction and high stability.

Type III restriction enzymes communicate in 1D without looping between their target sites.

Slide into action: dynamic shuttling of HIV reverse transcriptase on nucleic acid substrates.

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1224-1229

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scholarly article

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10.1038/NSMB.1716

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12

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16

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2009-11-08T00:00:00Z

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38075389

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19898474

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2889498

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