Deep sequencing reveals distinct patterns of DNA methylation in prostate cancer. - Test2 - elhamkhani - TriplyDB

Deep sequencing reveals distinct patterns of DNA methylation in prostate cancer.

Deep sequencing reveals distinct patterns of DNA methylation in prostate cancer.

http://www.wikidata.org/entity/Q33949373

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Perinatal bisphenol A exposure promotes dose-dependent alterations of the mouse methylome Sox2 is an androgen receptor-repressed gene that promotes castration-resistant prostate cancer Investigative pathology: leading the post-genomic revolution Cancer diagnostic classifiers based on quantitative DNA methylation Epigenomic profiling of prostate cancer identifies differentially methylated genes in TMPRSS2:ERG fusion-positive versus fusion-negative tumors.Cancer genome sequencing: understanding malignancy as a disease of the genome, its conformation, and its evolution.A survey of best practices for RNA-seq data analysis Bisphenol A-associated alterations in genome-wide DNA methylation and gene expression patterns reveal sequence-dependent and non-monotonic effects in human fetal liver Association of DSC3 mRNA down-regulation in prostate cancer with promoter hypermethylation and poor prognosis Enhanced Methylation Analysis by Recovery of Unsequenceable Fragments Detection of differential DNA methylation in repetitive DNA of mice and humans perinatally exposed to bisphenol A Global methylation patterns in idiopathic pulmonary fibrosis Combined genetic and epigenetic interferences with interferon signaling expose prostate cancer cells to viral infection A novel patient-derived intra-femoral xenograft model of bone metastatic prostate cancer that recapitulates mixed osteolytic and osteoblastic lesions.Inferring the expression variability of human transposable element-derived exons by linear model analysis of deep RNA sequencing data.Methods for identifying differentially methylated regions for sequence- and array-based data.Genome-wide DNA methylation measurements in prostate tissues uncovers novel prostate cancer diagnostic biomarkers and transcription factor binding patterns.LncRNAs2Pathways: Identifying the pathways influenced by a set of lncRNAs of interest based on a global network propagation method.Characterization of HPV DNA methylation of contiguous CpG sites by bisulfite treatment and massively parallel sequencing-the FRAGMENT approach.Integrative analysis reveals disease-associated genes and biomarkers for prostate cancer progression.Interrogating genomic and epigenomic data to understand prostate cancer Genome wide analysis of acute myeloid leukemia reveal leukemia specific methylome and subtype specific hypomethylation of repeats.mtDNA germ line variation mediated ROS generates retrograde signaling and induces pro-cancerous metabolic features Molecular pathways and targets in prostate cancer Copy-number-aware differential analysis of quantitative DNA sequencing data Identification of new differentially methylated genes that have potential functional consequences in prostate cancer.Genome-wide DNA methylome analysis reveals epigenetically dysregulated non-coding RNAs in human breast cancer.ERG induces epigenetic activation of Tudor domain-containing protein 1 (TDRD1) in ERG rearrangement-positive prostate cancer.The Molecular Taxonomy of Primary Prostate Cancer.Association between RASSF1A promoter methylation and prostate cancer: a systematic review and meta-analysis.Identification of differentially-expressed genes by DNA methylation in cervical cancer.Inter-locus as well as intra-locus heterogeneity in LINE-1 promoter methylation in common human cancers suggests selective demethylation pressure at specific CpGs.SNAI2/Slug gene is silenced in prostate cancer and regulates neuroendocrine differentiation, metastasis-suppressor and pluripotency gene expression.Effects of phthalate exposure on asthma may be mediated through alterations in DNA methylation.DNA Methylation-Guided Prediction of Clinical Failure in High-Risk Prostate Cancer swDMR: A Sliding Window Approach to Identify Differentially Methylated Regions Based on Whole Genome Bisulfite Sequencing.Performance of Different Analytical Software Packages in Quantification of DNA Methylation by Pyrosequencing Diametrically opposite methylome-transcriptome relationships in high- and low-CpG promoter genes in postmitotic neural rat tissue.Zseq: An Approach for Preprocessing Next-Generation Sequencing Data.Methylome-wide Sequencing Detects DNA Hypermethylation Distinguishing Indolent from Aggressive Prostate Cancer

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P2860

Deep sequencing reveals distinct patterns of DNA methylation in prostate cancer.

http://www.wikidata.org/entity/Q33949373

description

2011 nî lūn-bûn

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2011 թուականի Յուլիսին հրատարակուած գիտական յօդուած

@hyw

2011 թվականի հուլիսին հրատարակված գիտական հոդված

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2011年の論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年論文

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2011年论文

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name

Deep sequencing reveals distinct patterns of DNA methylation in prostate cancer.

@ast

Deep sequencing reveals distinct patterns of DNA methylation in prostate cancer.

@en

type

label

Deep sequencing reveals distinct patterns of DNA methylation in prostate cancer.

@ast

Deep sequencing reveals distinct patterns of DNA methylation in prostate cancer.

@en

prefLabel

Deep sequencing reveals distinct patterns of DNA methylation in prostate cancer.

@ast

Deep sequencing reveals distinct patterns of DNA methylation in prostate cancer.

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Genome Research

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Deep sequencing reveals distinct patterns of DNA methylation in prostate cancer.

@en

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Arul M Chinnaiyan

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Catherine Grasso

http://www.w3.org/2001/XMLSchema#string

Christina Huang

http://www.w3.org/2001/XMLSchema#string

Christopher A Maher

http://www.w3.org/2001/XMLSchema#string

Daniel Robinson

http://www.w3.org/2001/XMLSchema#string

Hal D Kominsky

http://www.w3.org/2001/XMLSchema#string

Javed Siddiqui

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Jindan Yu

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Jung H Kim

http://www.w3.org/2001/XMLSchema#string

Lee Sam

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P2860

Discovery of novel hypermethylated genes in prostate cancer using genomic CpG island microarrays

DNA methylation patterns and epigenetic memory

An integrated network of androgen receptor, polycomb, and TMPRSS2-ERG gene fusions in prostate cancer progression

Comprehensive analysis of CpG islands in human chromosomes 21 and 22

Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes

Significance analysis of microarrays applied to the ionizing radiation response

DNA methylation profiling of human chromosomes 6, 20 and 22

The genomic complexity of primary human prostate cancer

Genome-scale DNA methylation maps of pluripotent and differentiated cells

The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores

P304

1028-1041

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scholarly article

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10.1101/GR.119347.110

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7

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21

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John R. Prensner

Zhaohui Steve Qin

Nallasivam Palanisamy

Shanker Kalyana-Sundaram

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2011-07-01T00:00:00Z

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51463120

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21724842

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DNA methylation

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3129246

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