Full-length haplotype reconstruction to infer the structure of heterogeneous virus populations. - Test2 - elhamkhani - TriplyDB

Full-length haplotype reconstruction to infer the structure of heterogeneous virus populations.

Full-length haplotype reconstruction to infer the structure of heterogeneous virus populations.

http://www.wikidata.org/entity/Q34044256

about

Resistance of Hepatitis C Virus to Inhibitors: Complexity and Clinical Implications Differences in the Selection Bottleneck between Modes of Sexual Transmission Influence the Genetic Composition of the HIV-1 Founder Virus Advanced molecular surveillance of hepatitis C virus In Vivo and in Vitro Proteome Analysis of Human Immunodeficiency Virus (HIV)-1-infected, Human CD4+ T Cells.Estimation of genetic diversity in viral populations from next generation sequencing data with extremely deep coverage Third generation sequencing technologies applied to diagnostic microbiology: benefits and challenges in applications and data analysis.Deconvoluting the composition of low-frequency hepatitis C viral quasispecies: comparison of genotypes and NS3 resistance-associated variants between HCV/HIV coinfected hemophiliacs and HCV monoinfected patients in Japan.ViQuaS: an improved reconstruction pipeline for viral quasispecies spectra generated by next-generation sequencing.Frequency-based haplotype reconstruction from deep sequencing data of bacterial populations.Creation of Functional Viruses from Non-Functional cDNA Clones Obtained from an RNA Virus Population by the Use of Ancestral Reconstruction.A Pan-HIV Strategy for Complete Genome Sequencing.Viral deep sequencing needs an adaptive approach: IRMA, the iterative refinement meta-assembler.Quasispecies Analyses of the HIV-1 Near-full-length Genome With Illumina MiSeq.Quantifying Next Generation Sequencing Sample Pre-Processing Bias in HIV-1 Complete Genome Sequencing.Multiplexed highly-accurate DNA sequencing of closely-related HIV-1 variants using continuous long reads from single molecule, real-time sequencing.Monocyte-derived macrophages exhibit distinct and more restricted HIV-1 integration site repertoire than CD4(+) T cells.Droplet barcoding for massively parallel single-molecule deep sequencing Beyond the whole genome consensus: unravelling of PRRSV phylogenomics using next generation sequencing technologies.A random forest classifier for detecting rare variants in NGS data from viral populations.De novo assembly of viral quasispecies using overlap graphs Characterization of Hepatitis C Virus (HCV) Envelope Diversification from Acute to Chronic Infection within a Sexually Transmitted HCV Cluster by Using Single-Molecule, Real-Time Sequencing.Time-Sampled Population Sequencing Reveals the Interplay of Selection and Genetic Drift in Experimental Evolution of Potato Virus Y.Differentiation of acute from chronic hepatitis C virus infection by nonstructural 5B deep sequencing: a population-level tool for incidence estimation.Rapid Sequencing of Complete env Genes from Primary HIV-1 Samples.Variability Studies of Two Prunus-Infecting Fabaviruses with the Aid of High-Throughput Sequencing.Mapping the Evolutionary Potential of RNA Viruses.Easy and accurate reconstruction of whole HIV genomes from short-read sequence data with shiver.Challenges in the analysis of viral metagenomes.Viral quasispecies reconstruction via tensor factorization with successive read removal.Universal Target Capture of HIV Sequences From NGS Libraries Estimating the mutational fitness effects distribution during early HIV infection

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P2860

Full-length haplotype reconstruction to infer the structure of heterogeneous virus populations.

http://www.wikidata.org/entity/Q34044256

description

2014 nî lūn-bûn

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2014 թուականի Յունիսին հրատարակուած գիտական յօդուած

@hyw

2014 թվականի հունիսին հրատարակված գիտական հոդված

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2014年の論文

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2014年論文

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2014年論文

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2014年論文

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2014年論文

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2014年論文

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2014年论文

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name

Full-length haplotype reconstr ...... terogeneous virus populations.

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Full-length haplotype reconstr ...... terogeneous virus populations.

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Full-length haplotype reconstr ...... terogeneous virus populations.

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type

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Full-length haplotype reconstr ...... terogeneous virus populations.

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Full-length haplotype reconstr ...... terogeneous virus populations.

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Full-length haplotype reconstr ...... terogeneous virus populations.

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Full-length haplotype reconstr ...... terogeneous virus populations.

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Full-length haplotype reconstr ...... terogeneous virus populations.

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Nucleic Acids Research

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Full-length haplotype reconstr ...... terogeneous virus populations.

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P2093

Andrea Patrignani

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Armin Töpfer

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Beda Joos

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Christian Beisel

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Christine Leemann

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Maria Rita Lecca

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Martin Däumer

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Melanie Rey

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Nottania K Campbell

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Peter Rusert

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P2860

Genome sequencing in microfabricated high-density picolitre reactors

Accurate whole human genome sequencing using reversible terminator chemistry

Single cell genomics: an individual look at microbes

Viral quasispecies evolution

Sequencing technologies - the next generation

Real-time DNA sequencing from single polymerase molecules

Challenges and opportunities in estimating viral genetic diversity from next-generation sequencing data

Reconstructing the Dynamics of HIV Evolution within Hosts from Serial Deep Sequence Data

Whole genome deep sequencing of HIV-1 reveals the impact of early minor variants upon immune recognition during acute infection.

Reconstruction of viral population structure from next-generation sequencing data using multicommodity flows

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e115

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scholarly article

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10.1093/NAR/GKU537

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14

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42

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Alexandra Trkola

Huldrych F Günthard

Niko Beerenwinkel

Francesca Di Giallonardo

Karin J Metzner

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2014-06-27T00:00:00Z

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263506059

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24972832

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4132706

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