Comprehensive polyadenylation site maps in yeast and human reveal pervasive alternative polyadenylation. - Test2 - elhamkhani - TriplyDB

Comprehensive polyadenylation site maps in yeast and human reveal pervasive alternative polyadenylation.

Comprehensive polyadenylation site maps in yeast and human reveal pervasive alternative polyadenylation.

http://www.wikidata.org/entity/Q34498318

about

Genomic analysis of the hydrocarbon-producing, cellulolytic, endophytic fungus Ascocoryne sarcoides ePAT: a simple method to tag adenylated RNA to measure poly(A)-tail length and other 3' RACE applications Sequencing technologies and genome sequencing Processing and transcriptome expansion at the mRNA 3' end in health and disease: finding the right end Disengaging polymerase: terminating RNA polymerase II transcription in budding yeast Mechanisms and consequences of alternative polyadenylation Means to an end: mechanisms of alternative polyadenylation of messenger RNA precursors Proteins involved in the degradation of cytoplasmic mRNA in the major eukaryotic model systems Alternative cleavage and polyadenylation: the long and short of it Genome-wide alternative polyadenylation in animals: insights from high-throughput technologies All's well that ends well: alternative polyadenylation and its implications for stem cell biology Retroviral strategy to stabilize viral RNA Cdc48-associated complex bound to 60S particles is required for the clearance of aberrant translation products.Rat1p maintains RNA polymerase II CTD phosphorylation balance The Landscape of long noncoding RNA classification TREM2 and the neuroimmunology of Alzheimer's disease Genome-wide mapping of yeast RNA polymerase II termination De novo assembly of the grass carp Ctenopharyngodon idella transcriptome to identify miRNA targets associated with motile aeromonad septicemia Polyadenylation site-specific differences in the activity of the neuronal βCstF-64 protein in PC-12 cells RNA sequencing: advances, challenges and opportunities PAR-CLIP data indicate that Nrd1-Nab3-dependent transcription termination regulates expression of hundreds of protein coding genes in yeast A comprehensive analysis of 3' end sequencing data sets reveals novel polyadenylation signals and the repressive role of heterogeneous ribonucleoprotein C on cleavage and polyadenylation Genome-Wide Analysis and Functional Characterization of the Polyadenylation Site in Pigs Using RNAseq Data Strand-specific RNA-Seq reveals widespread and developmentally regulated transcription of natural antisense transcripts in Plasmodium falciparum Alternative polyadenylation diversifies post-transcriptional regulation by selective RNA-protein interactions.Bioinformatics analysis of alternative polyadenylation in green alga Chlamydomonas reinhardtii using transcriptome sequences from three different sequencing platforms Natural antisense transcripts are significantly involved in regulation of drought stress in maize.Pervasive and dynamic protein binding sites of the mRNA transcriptome in Saccharomyces cerevisiae 3'UTRs take a long shot in the brain.The polyadenylation code: a unified model for the regulation of mRNA alternative polyadenylation.Defining the 5΄ and 3΄ landscape of the Drosophila transcriptome with Exo-seq and RNaseH-seq.Genome-wide identification of transcript start and end sites by transcript isoform sequencing.RNA sequencing: from tag-based profiling to resolving complete transcript structure.Functional consequences of bidirectional promoters.SCOPE++: sequence classification of homoPolymer emissions.Ending the message: poly(A) signals then and now Theoretical analysis of competing conformational transitions in superhelical DNA.Global gene expression analysis of the zoonotic parasite Trichinella spiralis revealed novel genes in host parasite interaction.Fip1 regulates mRNA alternative polyadenylation to promote stem cell self-renewal Incorporating RNA-seq data into the zebrafish Ensembl genebuild

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Comprehensive polyadenylation site maps in yeast and human reveal pervasive alternative polyadenylation.

http://www.wikidata.org/entity/Q34498318

description

2010 nî lūn-bûn

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2010 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած

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2010 թվականի դեկտեմբերին հրատարակված գիտական հոդված

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2010年の論文

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2010年論文

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2010年論文

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2010年論文

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2010年論文

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2010年論文

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2010年论文

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Comprehensive polyadenylation ...... e alternative polyadenylation.

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Comprehensive polyadenylation ...... e alternative polyadenylation.

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Comprehensive polyadenylation ...... e alternative polyadenylation.

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Comprehensive polyadenylation ...... e alternative polyadenylation.

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Comprehensive polyadenylation ...... e alternative polyadenylation.

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Elane Fishilevich

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Fatih Ozsolak

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Patrice M Milos

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P2860

Most "dark matter" transcripts are associated with known genes

A large fraction of extragenic RNA pol II transcription sites overlap enhancers

Addition of poly(A) and poly(A)-rich tails during RNA degradation in the cytoplasm of human cells

Short GCG expansions in the PABP2 gene cause oculopharyngeal muscular dystrophy

Human 5' --> 3' exonuclease Xrn2 promotes transcription termination at co-transcriptional cleavage sites

RNA exosome depletion reveals transcription upstream of active human promoters

Quantitative comparison of EST libraries requires compensation for systematic biases in cDNA generation

A large-scale analysis of mRNA polyadenylation of human and mouse genes

The transcriptional landscape of the yeast genome defined by RNA sequencing

Induced ncRNAs allosterically modify RNA-binding proteins in cis to inhibit transcription

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Sylvain Foissac

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