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Consensus sequence ZenGenome-wide prediction, display and refinement of binding sites with information theory-based modelsThe shape of the DNA minor groove directs binding by the DNA-bending protein FisControl of DNA minor groove width and Fis protein binding by the purine 2-amino groupImproved predictions of transcription factor binding sites using physicochemical features of DNA.In vitro selection of integration host factor binding sitesContributions of UP elements and the transcription factor FIS to expression from the seven rrn P1 promoters in Escherichia coli.Role of decreased levels of Fis histone-like protein in Crohn's disease-associated adherent invasive Escherichia coli LF82 bacteria interacting with intestinal epithelial cellsActivation of Escherichia coli leuV transcription by FIS.Strong minor groove base conservation in sequence logos implies DNA distortion or base flipping during replication and transcription initiation.The P1 phage replication protein RepA contacts an otherwise inaccessible thymine N3 proton by DNA distortion or base flipping.Growth phase and growth rate regulation of the rapA gene, encoding the RNA polymerase-associated protein RapA in Escherichia coli.Regulation of the vapBC-1 toxin-antitoxin locus in nontypeable Haemophilus influenzae.DNA recognition by a σ(54) transcriptional activator from Aquifex aeolicusRepressor of phage 16-3 with altered binding specificity indicates spatial differences in repressor-operator complexesThe phi29 transcriptional regulator contacts the nucleoid protein p6 to organize a repression complexAltered regulation of the OmpF porin by Fis in Escherichia coli during an evolution experiment and between B and K-12 strains.Common and variable contributions of Fis residues to high-affinity binding at different DNA sequencesBinding of nucleoid-associated protein fis to DNA is regulated by DNA breathing dynamics.E. coli Fis protein insulates the cbpA gene from uncontrolled transcriptionThe seven E. coli ribosomal RNA operon upstream regulatory regions differ in structure and transcription factor binding efficiencies.Concentration-dependent exchange accelerates turnover of proteins bound to double-stranded DNA.Genome-wide analysis of the salmonella Fis regulon and its regulatory mechanism on pathogenicity islands.A fast weak motif-finding algorithm based on community detection in graphs.CorreLogo: an online server for 3D sequence logos of RNA and DNA alignmentsClaude Shannon: biologist. The founder of information theory used biology to formulate the channel capacity.Interpretation of mRNA splicing mutations in genetic disease: review of the literature and guidelines for information-theoretical analysis.Force-driven unbinding of proteins HU and Fis from DNA quantified using a thermodynamic Maxwell relation.A brief review of molecular information theory.Anatomy of Escherichia coli sigma70 promoters.DNA Sequence Determinants Controlling Affinity, Stability and Shape of DNA Complexes Bound by the Nucleoid Protein Fis.Mechanism of chromosome compaction and looping by the Escherichia coli nucleoid protein FisCorrelation between binding rate constants and individual information of E. coli Fis binding sitesTwenty Years of Delila and Molecular Information Theory: The Altenberg-Austin Workshop in Theoretical Biology Biological Information, Beyond Metaphor: Causality, Explanation, and Unification Altenberg, Austria, 11-14 July 2002.Discovery of Fur binding site clusters in Escherichia coli by information theory models.Genome-wide analysis of Fis binding in Escherichia coli indicates a causative role for A-/AT-tracts.Molecular flip-flops formed by overlapping Fis sites.Multiple site-specific binding of Fis protein to Escherichia coli nuoA-N promoter DNA and its impact on DNA topology visualised by means of scanning force microscopy.Gene clusters reflecting macrodomain structure respond to nucleoid perturbations.Recovering motifs from biased genomes: application of signal correction.
P2860
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P2860
description
1997 nî lūn-bûn
@nan
1997 թուականի Դեկտեմբերին հրատարակուած գիտական յօդուած
@hyw
1997 թվականի դեկտեմբերին հրատարակված գիտական հոդված
@hy
1997年の論文
@ja
1997年論文
@yue
1997年論文
@zh-hant
1997年論文
@zh-hk
1997年論文
@zh-mo
1997年論文
@zh-tw
1997年论文
@wuu
name
Information analysis of Fis binding sites
@ast
Information analysis of Fis binding sites
@en
Information analysis of Fis binding sites
@nl
type
label
Information analysis of Fis binding sites
@ast
Information analysis of Fis binding sites
@en
Information analysis of Fis binding sites
@nl
prefLabel
Information analysis of Fis binding sites
@ast
Information analysis of Fis binding sites
@en
Information analysis of Fis binding sites
@nl
P2093
P2860
P356
P1476
Information analysis of Fis binding sites
@en
P2093
L E Stewart
P N Hengen
S L Bartram
P2860
P304
P356
10.1093/NAR/25.24.4994
P407
P577
1997-12-01T00:00:00Z