Experimental design, preprocessing, normalization and differential expression analysis of small RNA sequencing experiments.
about
The dicer-like1 homolog fuzzy tassel is required for the regulation of meristem determinacy in the inflorescence and vegetative growth in maizePhytophthora have distinct endogenous small RNA populations that include short interfering and microRNAsBioinformatics of Cancer ncRNA in High Throughput Sequencing: Present State and ChallengesDeep-sequencing protocols influence the results obtained in small-RNA sequencingDeep sequencing of small RNAs from human skin reveals major alterations in the psoriasis miRNAomeToward reliable biomarker signatures in the age of liquid biopsies - how to standardize the small RNA-Seq workflowImproving small RNA-seq by using a synthetic spike-in set for size-range quality control together with a set for data normalization.DECODE: an integrated differential co-expression and differential expression analysis of gene expression data.iSRAP - a one-touch research tool for rapid profiling of small RNA-seq data.Noncoding RNA: Current Deep Sequencing Data Analysis Approaches and Challenges.DNApi: A De Novo Adapter Prediction Algorithm for Small RNA Sequencing Data.Considerations and complications of mapping small RNA high-throughput data to transposable elementsDeep sequencing reveals novel microRNAs and regulation of microRNA expression during cell senescence.Evidence for post-transcriptional regulation of clustered microRNAs in DrosophilaRetrotransposon-centered analysis of piRNA targeting shows a shift from active to passive retrotransposon transcription in developing mouse testesCharacterization of the stress associated microRNAs in Glycine max by deep sequencing.Comparison of hepatocellular carcinoma miRNA expression profiling as evaluated by next generation sequencing and microarray.Evaluation of normalization methods in mammalian microRNA-Seq data.Bioinformatic analysis of barcoded cDNA libraries for small RNA profiling by next-generation sequencing.Discovery and analysis of microRNAs in Leymus chinensis under saline-alkali and drought stress using high-throughput sequencing.Expression of small RNA in Aphis gossypii and its potential role in the resistance interaction with melon.Identifying conserved and novel microRNAs in developing seeds of Brassica napus using deep sequencing.Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon.Genome-wide analysis of leafbladeless1-regulated and phased small RNAs underscores the importance of the TAS3 ta-siRNA pathway to maize development.Genome-wide identification and characterization of cadmium-responsive microRNAs and their target genes in radish (Raphanus sativus L.) rootsHigh-Throughput Sequencing Reveals Diverse Sets of Conserved, Nonconserved, and Species-Specific miRNAs in Jute.Intramolecular circularization increases efficiency of RNA sequencing and enables CLIP-Seq of nuclear RNA from human cells.Characterizing ncRNAs in Human Pathogenic Protists Using High-Throughput Sequencing Technology.The search for endogenous siRNAs in the mammalian brainIdentification and profiling of conserved and novel microRNAs in Laodelphax striatellus in response to rice black-streaked dwarf virus (RBSDV) infection.Small RNA and PARE sequencing in flower bud reveal the involvement of sRNAs in endodormancy release of Japanese pear (Pyrus pyrifolia 'Kosui').The Influence of Genotype and Environment on Small RNA Profiles in Grapevine Berry.Small RNA deep sequencing discriminates subsets of extracellular vesicles released by melanoma cells--Evidence of unique microRNA cargos.Comprehensive processing of high-throughput small RNA sequencing data including quality checking, normalization, and differential expression analysis using the UEA sRNA WorkbenchMicroRNA in Aging: From Discovery to BiologyAutotetraploid rice methylome analysis reveals methylation variation of transposable elements and their effects on gene expression.Mobile small RNAs regulate genome-wide DNA methylation.Identification and annotation of small RNA genes using ShortStackMicroRNAs Associated with Caste Determination and Differentiation in a Primitively Eusocial Insect.MicroRNAs in fruit trees: discovery, diversity and future research directions.
P2860
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P2860
Experimental design, preprocessing, normalization and differential expression analysis of small RNA sequencing experiments.
description
2011 nî lūn-bûn
@nan
2011 թուականի Փետրուարին հրատարակուած գիտական յօդուած
@hyw
2011 թվականի փետրվարին հրատարակված գիտական հոդված
@hy
2011年の論文
@ja
2011年論文
@yue
2011年論文
@zh-hant
2011年論文
@zh-hk
2011年論文
@zh-mo
2011年論文
@zh-tw
2011年论文
@wuu
name
Experimental design, preproces ...... ll RNA sequencing experiments.
@ast
Experimental design, preproces ...... ll RNA sequencing experiments.
@en
Experimental design, preproces ...... ll RNA sequencing experiments.
@nl
type
label
Experimental design, preproces ...... ll RNA sequencing experiments.
@ast
Experimental design, preproces ...... ll RNA sequencing experiments.
@en
Experimental design, preproces ...... ll RNA sequencing experiments.
@nl
prefLabel
Experimental design, preproces ...... ll RNA sequencing experiments.
@ast
Experimental design, preproces ...... ll RNA sequencing experiments.
@en
Experimental design, preproces ...... ll RNA sequencing experiments.
@nl
P2860
P356
P1476
Experimental design, preproces ...... all RNA sequencing experiments
@en
P2093
Kevin P McCormick
P2860
P2888
P356
10.1186/1758-907X-2-2
P577
2011-02-28T00:00:00Z
P5875
P6179
1019025014