Metabolic engineering of Escherichia coli for the production of L-valine based on transcriptome analysis and in silico gene knockout simulation - Test2 - elhamkhani - TriplyDB

Metabolic engineering of Escherichia coli for the production of L-valine based on transcriptome analysis and in silico gene knockout simulation

Metabolic engineering of Escherichia coli for the production of L-valine based on transcriptome analysis and in silico gene knockout simulation

http://www.wikidata.org/entity/Q35762068

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OptForce: an optimization procedure for identifying all genetic manipulations leading to targeted overproductions Rational improvement of the engineered isobutanol-producing Bacillus subtilis by elementary mode analysis The genome sequence of E. coli W (ATCC 9637): comparative genome analysis and an improved genome-scale reconstruction of E. coli Towards a unifying, systems biology understanding of large-scale cellular death and destruction caused by poorly liganded iron: Parkinson's, Huntington's, Alzheimer's, prions, bactericides, chemical toxicology and others as examples Metabolic processes of Methanococcus maripaludis and potential applications Systems Biology Approaches to Understand Natural Products Biosynthesis Systems metabolic engineering design: fatty acid production as an emerging case study Metabolomics and systems pharmacology: why and how to model the human metabolic network for drug discovery Analysis of genetic variation and potential applications in genome-scale metabolic modeling In Silico Constraint-Based Strain Optimization Methods: the Quest for Optimal Cell Factories Data-driven integration of genome-scale regulatory and metabolic network models Constraint-based model of Shewanella oneidensis MR-1 metabolism: a tool for data analysis and hypothesis generation Genome-scale reconstruction of Escherichia coli's transcriptional and translational machinery: a knowledge base, its mathematical formulation, and its functional characterization Fumaric acid production in Saccharomyces cerevisiae by in silico aided metabolic engineering Reconstruction of Danio rerio metabolic model accounting for subcellular compartmentalisation k-OptForce: integrating kinetics with flux balance analysis for strain design Prospects of microbial cell factories developed through systems metabolic engineering Designing intracellular metabolism for production of target compounds by introducing a heterologous metabolic reaction based on a Synechosystis sp. 6803 genome-scale model A refined genome-scale reconstruction of Chlamydomonas metabolism provides a platform for systems-level analyses Elementary Flux Mode Analysis of Acetyl-CoA Pathway in Carboxydothermus hydrogenoformans Z-2901 Structure, function, and mechanism of the nickel metalloenzymes, CO dehydrogenase, and acetyl-CoA synthase Direct cadaverine production from cellobiose using β-glucosidase displaying Escherichia coli Towards a carbon-negative sustainable bio-based economy.Exploiting genomic knowledge in optimising molecular breeding programmes: algorithms from evolutionary computing Redesigning Escherichia coli metabolism for anaerobic production of isobutanol Genome-scale consequences of cofactor balancing in engineered pentose utilization pathways in Saccharomyces cerevisiae A genome-scale metabolic reconstruction of Pseudomonas putida KT2440: iJN746 as a cell factory Metabolic engineering of Corynebacterium glutamicum for enhanced production of 5-aminovaleric acid The virtue of innovation: innovation through the lenses of biological evolution Production of medium chain length polyhydroxyalkanoate in metabolic flux optimized Pseudomonas putida.A Method to Constrain Genome-Scale Models with 13C Labeling Data.OptORF: Optimal metabolic and regulatory perturbations for metabolic engineering of microbial strains.Quantitative assignment of reaction directionality in constraint-based models of metabolism: application to Escherichia coli Increased 3-hydroxypropionic acid production from glycerol, by modification of central metabolism in Escherichia coli.Enhancement of acetoin production in Candida glabrata by in silico-aided metabolic engineering.Enhanced display of lipase on the Escherichia coli cell surface, based on transcriptome analysis.A detailed genome-wide reconstruction of mouse metabolism based on human Recon 1.Metabolic engineering for production of biorenewable fuels and chemicals: contributions of synthetic biology.In silico identification of gene amplification targets for improvement of lycopene production.Expanding a dynamic flux balance model of yeast fermentation to genome-scale

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Metabolic engineering of Escherichia coli for the production of L-valine based on transcriptome analysis and in silico gene knockout simulation

http://www.wikidata.org/entity/Q35762068

description

2007 nî lūn-bûn

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Metabolic engineering of Esche ...... ilico gene knockout simulation

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Metabolic engineering of Esche ...... ilico gene knockout simulation

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Proceedings of the National Academy of Sciences of the United States of America

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Metabolic engineering of Esche ...... ilico gene knockout simulation

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Jin Hwan Park

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Kwang Ho Lee

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Tae Yong Kim

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P2860

An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR)

Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

Analysis of optimality in natural and perturbed metabolic networks

The ilvIH operon of Escherichia coli is positively regulated

Feedback-resistant acetohydroxy acid synthase increases valine production in Corynebacterium glutamicum.

Rational design of a Corynebacterium glutamicum pantothenate production strain and its characterization by metabolic flux analysis and genome-wide transcriptional profiling.

Export of L-isoleucine from Corynebacterium glutamicum: a two-gene-encoded member of a new translocator family.

The yeaS (leuE) gene of Escherichia coli encodes an exporter of leucine, and the Lrp protein regulates its expression.

Process control for enhanced L-phenylalanine production using different recombinant Escherichia coli strains.

Global expression profiling and physiological characterization of Corynebacterium glutamicum grown in the presence of L-valine.

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