Expanding the chemical cross-linking toolbox by the use of multiple proteases and enrichment by size exclusion chromatography - Test2 - elhamkhani - TriplyDB

Expanding the chemical cross-linking toolbox by the use of multiple proteases and enrichment by size exclusion chromatography

Expanding the chemical cross-linking toolbox by the use of multiple proteases and enrichment by size exclusion chromatography

http://www.wikidata.org/entity/Q35863291

about

The Use of Advanced Mass Spectrometry to Dissect the Life-Cycle of Photosystem II Mass spectrometry in studies of protein thiol chemistry and signaling: opportunities and caveats The architecture of a eukaryotic replisome.The molecular architecture of the eukaryotic chaperonin TRiC/CCT Architecture of the large subunit of the mammalian mitochondrial ribosome The complete structure of the large subunit of the mammalian mitochondrial ribosome VESICULAR TRANSPORT. A structure of the COPI coat and the role of coat proteins in membrane vesicle assembly Molecular architecture of the ATP-dependent chromatin-remodeling complex SWR1.Molecular architecture and function of the SEA complex, a modulator of the TORC1 pathway.Molecular architecture of the 40S⋅eIF1⋅eIF3 translation initiation complex Structural model of the dimeric Parkinson's protein LRRK2 reveals a compact architecture involving distant interdomain contacts Cross-link guided molecular modeling with ROSETTA Antigenic Characterization of the HCMV gH/gL/gO and Pentamer Cell Entry Complexes Reveals Binding Sites for Potently Neutralizing Human Antibodies Architecture of the yeast Elongator complex xTract: software for characterizing conformational changes of protein complexes by quantitative cross-linking mass spectrometry The advancement of chemical cross-linking and mass spectrometry for structural proteomics: from single proteins to protein interaction networks.Large Scale Chemical Cross-linking Mass Spectrometry Perspectives.Structural characterization by cross-linking reveals the detailed architecture of a coatomer-related heptameric module from the nuclear pore complex.Resolution of protein structure by mass spectrometry.The MTA1 subunit of the nucleosome remodeling and deacetylase complex can recruit two copies of RBBP4/7.In planta chemical cross-linking and mass spectrometry analysis of protein structure and interaction in Arabidopsis.Cross-linking immunoprecipitation-MS (xIP-MS): Topological Analysis of Chromatin-associated Protein Complexes Using Single Affinity Purification.Chemical cross-linking/mass spectrometry targeting acidic residues in proteins and protein complexes Distance restraints from crosslinking mass spectrometry: mining a molecular dynamics simulation database to evaluate lysine-lysine distances Probing the transient interaction between the small heat-shock protein Hsp21 and a model substrate protein using crosslinking mass spectrometry.Crucial HSP70 co-chaperone complex unlocks metazoan protein disaggregation.Molecular architecture of the yeast Mediator complex.Reconstitution of active human core Mediator complex reveals a critical role of the MED14 subunit.Association of condensin with chromosomes depends on DNA binding by its HEAT-repeat subunits.Conformational States of macromolecular assemblies explored by integrative structure calculation.Structural basis for assembly and function of the Nup82 complex in the nuclear pore scaffold.Human liver cytochrome P450 3A4 ubiquitination: molecular recognition by UBC7-gp78 autocrine motility factor receptor and UbcH5a-CHIP-Hsc70-Hsp40 E2-E3 ubiquitin ligase complexes Xlink Analyzer: software for analysis and visualization of cross-linking data in the context of three-dimensional structures Combining a NHS ester and glutaraldehyde improves crosslinking prior to MALDI MS analysis of intact protein complexes.Joining forces: integrating proteomics and cross-linking with the mass spectrometry of intact complexes.Dynamics of ribosomal protein S1 on a bacterial ribosome with cross-linking and mass spectrometry.Mixed-isotope labeling with LC-IMS-MS for characterization of protein-protein interactions by chemical cross-linking.A strategy for dissecting the architectures of native macromolecular assemblies Chaperonin TRiC/CCT Modulates the Folding and Activity of Leukemogenic Fusion Oncoprotein AML1-ETO.Dynamic and flexible H3K9me3 bridging via HP1β dimerization establishes a plastic state of condensed chromatin.

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P2860

Expanding the chemical cross-linking toolbox by the use of multiple proteases and enrichment by size exclusion chromatography

http://www.wikidata.org/entity/Q35863291

description

2012 nî lūn-bûn

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Expanding the chemical cross-l ...... size exclusion chromatography

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Molecular & Cellular Proteomics

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Expanding the chemical cross-l ...... size exclusion chromatography

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Franz Herzog

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Friedrich Förster

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Roland Reischl

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Stefan Bohn

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Thomas Walzthoeni

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P2860

ModBase, a database of annotated comparative protein structure models, and associated resources

The predator becomes the prey: regulating the ubiquitin system by ubiquitylation and degradation

Crystal structure of the 20S proteasome from the archaeon T. acidophilum at 3.4 A resolution

Structure of 20S proteasome from yeast at 2.4 A resolution

Probability-based protein identification by searching sequence databases using mass spectrometry data

Architecture of the RNA polymerase II-TFIIF complex revealed by cross-linking and mass spectrometry.

Hydrogen exchange mass spectrometry for studying protein structure and dynamics

Recognition and processing of ubiquitin-protein conjugates by the proteasome

Mass spectrometry combined with oxidative labeling for exploring protein structure and folding.

Probing native protein structures by chemical cross-linking, mass spectrometry, and bioinformatics.

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10.1074/MCP.M111.014126

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3

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Alexander Leitner

Ruedi Aebersold

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2012-01-27T00:00:00Z

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3316732

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