Discovering functional linkages and uncharacterized cellular pathways using phylogenetic profile comparisons: a comprehensive assessment
about
Cohesive versus flexible evolution of functional modules in eukaryotesDetection of biochemical pathways by probabilistic matching of phyletic vectorsGenetic co-occurrence network across sequenced microbesCovariation of branch lengths in phylogenies of functionally related genesCo-evolutionary networks of genes and cellular processes across fungal speciesPhylogenetic profiling: how much input data is enough?Exploiting amino acid composition for predicting protein-protein interactionsPrioritizing orphan proteins for further study using phylogenomics and gene expression profiles in Streptomyces coelicolor.InPrePPI: an integrated evaluation method based on genomic context for predicting protein-protein interactions in prokaryotic genomes.Investigation of factors affecting prediction of protein-protein interaction networks by phylogenetic profiling.Denoising inferred functional association networks obtained by gene fusion analysisLimited functional conservation of a global regulator among related bacterial genera: Lrp in Escherichia, Proteus and VibrioThe topology of the bacterial co-conserved protein network and its implications for predicting protein function.Predicting protein linkages in bacteria: which method is best depends on task.In silico prioritisation of candidate genes for prokaryotic gene function discovery: an application of phylogenetic profiles.Comparison of eukaryotic phylogenetic profiling approaches using species tree aware methods.Inferring functional modules of protein families with probabilistic topic models.Comparative genomics of cell envelope components in mycobacteria.Selection of organisms for the co-evolution-based study of protein interactions.Toward an efficient method of identifying core genes for evolutionary and functional microbial phylogeniesProPhylo: partial phylogenetic profiling to guide protein family construction and assignment of biological processPhylogenetically informed logic relationships improve detection of biological network organization.Practical aspects of protein co-evolutionPAGED: a pathway and gene-set enrichment database to enable molecular phenotype discoveries.Detection of genomic idiosyncrasies using fuzzy phylogenetic profilesEvaluation of physical and functional protein-protein interaction prediction methods for detecting biological pathways.Tracing evolutionary footprints to identify novel gene functional linkagesPhylogenetic Co-Occurrence of ExoR, ExoS, and ChvI, Components of the RSI Bacterial Invasion Switch, Suggests a Key Adaptive Mechanism Regulating the Transition between Free-Living and Host-Invading Phases in Rhizobiales.Co-Inheritance Analysis within the Domains of Life Substantially Improves Network Inference by Phylogenetic Profiling.Identification of a core set of signature cell cycle genes whose relative order of time to peak expression is conserved across species.Effect of reference genome selection on the performance of computational methods for genome-wide protein-protein interaction predictionPPCM: Combing Multiple Classifiers to Improve Protein-Protein Interaction PredictionDeveloping of the Computer Method for Annotation of Bacterial Genes.Protein co-evolution, co-adaptation and interactions.Testing the accuracy of eukaryotic phylogenetic profiles for prediction of biological function.Embryonic stem cell interactomics: the beginning of a long road to biological function.Construction of Functional Gene Networks Using Phylogenetic Profiles.Genetic Bases of Fungal White Rot Wood Decay Predicted by Phylogenomic Analysis of Correlated Gene-Phenotype Evolution.An improved hypergeometric probability method for identification of functionally linked proteins using phylogenetic profiles.Metabolic Pathway Assignment of Plant Genes based on Phylogenetic Profiling-A Feasibility Study.
P2860
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P2860
Discovering functional linkages and uncharacterized cellular pathways using phylogenetic profile comparisons: a comprehensive assessment
description
2007 nî lūn-bûn
@nan
2007年の論文
@ja
2007年論文
@yue
2007年論文
@zh-hant
2007年論文
@zh-hk
2007年論文
@zh-mo
2007年論文
@zh-tw
2007年论文
@wuu
2007年论文
@zh
2007年论文
@zh-cn
name
Discovering functional linkage ...... ns: a comprehensive assessment
@ast
Discovering functional linkage ...... ns: a comprehensive assessment
@en
type
label
Discovering functional linkage ...... ns: a comprehensive assessment
@ast
Discovering functional linkage ...... ns: a comprehensive assessment
@en
prefLabel
Discovering functional linkage ...... ns: a comprehensive assessment
@ast
Discovering functional linkage ...... ns: a comprehensive assessment
@en
P2860
P356
P1433
P1476
Discovering functional linkage ...... ns: a comprehensive assessment
@en
P2093
Raja Jothi
P2860
P2888
P356
10.1186/1471-2105-8-173
P577
2007-05-23T00:00:00Z
P5875
P6179
1024236149