A mass-tolerant database search identifies a large proportion of unassigned spectra in shotgun proteomics as modified peptides
about
Cyclisation mechanisms in the biosynthesis of ribosomally synthesised and post-translationally modified peptidesExploring the potential of public proteomics dataNanoscale Extracellular Vesicle Analysis in Alzheimer's Disease Diagnosis and TherapyCardiovascular proteomics in the era of big data: experimental and computational advancesA large dataset of protein dynamics in the mammalian heart proteomeCross-talk between lipid and protein carbonylation in a dynamic cardiomyocyte model of mild nitroxidative stressPhosphoproteomics in the Age of Rapid and Deep Proteome Profiling.Seven perspectives on GPCR H/D-exchange proteomics methodsThe need to revisit published data: A concept and framework for complementary proteomics.Metaproteomic data analysis at a glance: advances in computational microbial community proteomics.Global Post-Translational Modification DiscoveryBayesian prediction of RNA translation from ribosome profilingLarge-scale analysis of post-translational modifications in E. coli under glucose-limiting conditions.Post-translational modifications of FDA-approved plasma biomarkers in glioblastoma samples.Alternative splicing shapes transcriptome but not proteome diversity in Physcomitrella patens.PyQuant: A Versatile Framework for Analysis of Quantitative Mass Spectrometry Data.Extensive identification and analysis of conserved small ORFs in animalsRecognizing millions of consistently unidentified spectra across hundreds of shotgun proteomics datasets.Fuzzy-FishNET: a highly reproducible protein complex-based approach for feature selection in comparative proteomicsGlobal Identification of Protein Post-translational Modifications in a Single-Pass Database Search.An informatic framework for decoding protein complexes by top-down mass spectrometry.Opening a SWATH Window on Posttranslational Modifications: Automated Pursuit of Modified Peptides.Elucidating Proteoform Families from Proteoform Intact-Mass and Lysine-Count Measurements.Mapping Proteoforms and Protein Complexes From King Cobra Venom Using Both Denaturing and Native Top-down Proteomics.Detection of Missing Proteins Using the PRIDE Database as a Source of Mass Spectrometry Evidence.Exome-based proteogenomics of HEK-293 human cell line: Coding genomic variants identified at the level of shotgun proteome.Rescuing discarded spectra: Full comprehensive analysis of a minimal proteome.Common errors in mass spectrometry-based analysis of post-translational modifications.Human Proteomic Variation Revealed by Combining RNA-Seq Proteogenomics and Global Post-Translational Modification (G-PTM) Search Strategy.MSFragger: ultrafast and comprehensive peptide identification in mass spectrometry-based proteomicsEvaluating de novo sequencing in proteomics: already an accurate alternative to database-driven peptide identification?Detergents: Friends not foes for high-performance membrane proteomics toward precision medicine.Using Proteomics Bioinformatics Tools and Resources in Proteogenomic Studies.Computational Methods in Mass Spectrometry-Based Proteomics.Advancement of mass spectrometry-based proteomics technologies to explore triple negative breast cancer.Metabolic regulation of gene expression through histone acylations.Unassigned MS/MS Spectra: Who Am I?Application of the half decimal place rule to increase the peptide identification rate.Systematic Errors in Peptide and Protein Identification and Quantification by Modified Peptides.Mass spectrometry-assisted gel-based proteomics in cancer biomarker discovery: approaches and application.
P2860
Q26738949-02E39D95-B5DB-470F-B61D-203D55318FF3Q26785886-04B0FF5F-9318-4AC8-93A5-C13446BC94ADQ28072312-FA92C371-4AC8-4547-9C3C-B8923A836251Q28074789-5AFA5238-3B56-43EB-9E4F-DF8BE7E0EED2Q28602653-6B6DF0C4-F5FD-4A3C-8B2A-EBA42F9A700FQ29248181-428C5C52-7DB5-44F2-B416-D60326BAB1A6Q30354536-790EDD16-D0CB-4FB4-A0FE-83D9E5ED403EQ30402263-BED9B17A-D448-43D5-A1D8-BD18081BF7F5Q31020487-152C1B50-F2A3-4102-8B4B-3A09C5B1DD15Q31112255-DF8AB1FB-106A-417B-B8D7-DDFD04226771Q33551556-0347C8F9-8471-4E37-9F96-4CE2DDABFDBEQ33557774-22E6EE6B-330E-4B92-8E9E-E9AB118677BEQ33568235-46C0CDD1-1239-436B-9854-4EDD13A6AB41Q33664151-438D719E-8BD1-41A1-943F-56320A29F19EQ33758717-088F0D8E-7DAD-47CA-A94F-4C87EE70ECF8Q36031993-F7CFFCE8-3BDC-4242-8C02-694D1A0B635AQ36056550-1BC4F8BD-99C2-48F2-8A04-BD2C27CBEA03Q36095680-31DD172C-9D6C-45D6-A3AB-49AA9F088143Q36258523-D28CBF91-9474-4258-91A4-8425FE19C4B8Q36272452-78918F0C-6E9B-45E6-A2F5-60CA0CEA084EQ36619314-31B067BC-537A-484D-B651-55FD5555F28BQ36745102-E22CFF28-97FF-4982-88D4-A6258DF91439Q37029640-D24EBF25-4D0D-44DA-9FE0-56E7C2A9A8D7Q37076901-D8C56071-BAB9-469F-887C-7F8B6E7C5BF6Q37400298-8DE0AB43-4427-4938-9D1D-C37281A6E661Q38392041-A3A14271-F64E-490B-BA91-5888955584EFQ38398091-E1357A0F-AC97-40A7-8FFE-718C83DE0CF9Q38669393-95845633-E1A8-4203-9289-1831FC050D35Q38794889-4281C77F-7016-4225-B96A-B4B5A26F9AD4Q38844572-4CE00F32-0A61-4B87-BA3F-C46B11B37B2AQ38860365-4B0D633C-9A6D-4098-AFBF-CA857600EAEFQ38955724-27502C20-A25B-4CE9-B7A8-D8A98AEDAAF1Q38968214-ED6E0C2B-AF7B-44BC-9849-170F6987E5DFQ38997181-F0210061-BED9-4935-8649-F65B64207033Q39021766-534835BC-5A2F-4BDD-8CEF-2F96349A435EQ39031046-6D28B578-C57F-4258-8786-15DEA828A0B2Q39099807-A539E29A-F7D3-4526-A083-62CA7628352AQ39223438-5663FF59-9A21-4B72-9E3A-C3D3FE0F4ADEQ39742946-D616078C-6D96-48D5-A63A-31899561A707Q41173805-B55CEFC4-E117-4474-B7B0-39AB1249775E
P2860
A mass-tolerant database search identifies a large proportion of unassigned spectra in shotgun proteomics as modified peptides
description
2015 nî lūn-bûn
@nan
2015年の論文
@ja
2015年論文
@yue
2015年論文
@zh-hant
2015年論文
@zh-hk
2015年論文
@zh-mo
2015年論文
@zh-tw
2015年论文
@wuu
2015年论文
@zh
2015年论文
@zh-cn
name
A mass-tolerant database searc ...... roteomics as modified peptides
@ast
A mass-tolerant database searc ...... roteomics as modified peptides
@en
type
label
A mass-tolerant database searc ...... roteomics as modified peptides
@ast
A mass-tolerant database searc ...... roteomics as modified peptides
@en
prefLabel
A mass-tolerant database searc ...... roteomics as modified peptides
@ast
A mass-tolerant database searc ...... roteomics as modified peptides
@en
P2093
P2860
P50
P356
P1433
P1476
A mass-tolerant database searc ...... roteomics as modified peptides
@en
P2093
Deepak Kolippakkam
Joel M Chick
P2860
P2888
P304
P356
10.1038/NBT.3267
P577
2015-06-15T00:00:00Z