A quantitative atlas of polyadenylation in five mammals. - Test2 - elhamkhani - TriplyDB

A quantitative atlas of polyadenylation in five mammals.

A quantitative atlas of polyadenylation in five mammals.

http://www.wikidata.org/entity/Q36021683

about

The organization and regulation of mRNA-protein complexes Processing and transcriptome expansion at the mRNA 3' end in health and disease: finding the right end RNA-Seq methods for transcriptome analysis FUS-mediated regulation of alternative RNA processing in neurons: insights from global transcriptome analysis Means to an end: mechanisms of alternative polyadenylation of messenger RNA precursors Alternative cleavage and polyadenylation: the long and short of it All's well that ends well: alternative polyadenylation and its implications for stem cell biology RNA-binding proteins in neurodegeneration: Seq and you shall receive AURA 2: Empowering discovery of post-transcriptional networks Comparative analysis of the base compositions of the pre-mRNA 3' cleaved-off region and the mRNA 3' untranslated region relative to the genomic base composition in animals and plants Experimental procedures to identify and validate specific mRNA targets of miRNAs A majority of m6A residues are in the last exons, allowing the potential for 3' UTR regulation Characterizing HSF1 Binding and Post-Translational Modifications of hsp70 Promoter in Cultured Cortical Neurons: Implications in the Heat-Shock Response Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation Transposable elements re-wire and fine-tune the transcriptome PlantAPA: A Portal for Visualization and Analysis of Alternative Polyadenylation in Plants.A comprehensive analysis of 3' end sequencing data sets reveals novel polyadenylation signals and the repressive role of heterogeneous ribonucleoprotein C on cleavage and polyadenylation Learning to Predict miRNA-mRNA Interactions from AGO CLIP Sequencing and CLASH Data.End Sequence Analysis Toolkit (ESAT) expands the extractable information from single-cell RNA-seq data.Genome-Wide Analysis and Functional Characterization of the Polyadenylation Site in Pigs Using RNAseq Data The More the Merrier-Complexity in Long Non-Coding RNA Loci Pilot genome-wide study of tandem 3' UTRs in esophageal cancer using high-throughput sequencing.Alternative polyadenylation diversifies post-transcriptional regulation by selective RNA-protein interactions.High-throughput sequencing of RNA isolated by cross-linking and immunoprecipitation (HITS-CLIP) to determine sites of binding of CstF-64 on nascent RNAs High-Resolution RNA Maps Suggest Common Principles of Splicing and Polyadenylation Regulation by TDP-43.Genome annotation for clinical genomic diagnostics: strengths and weaknesses Transcriptome analysis of human tissues and cell lines reveals one dominant transcript per gene Certain adenylated non-coding RNAs, including 5' leader sequences of primary microRNA transcripts, accumulate in mouse cells following depletion of the RNA helicase MTR4 Global analyses of the effect of different cellular contexts on microRNA targeting.Evolution at protein ends: major contribution of alternative transcription initiation and termination to the transcriptome and proteome diversity in mammals.3'UTRs take a long shot in the brain.Alternative Polyadenylation Patterns for Novel Gene Discovery and Classification in Cancer The polyadenylation code: a unified model for the regulation of mRNA alternative polyadenylation.Alternative polyadenylation of mRNA precursors.Experimental and Computational Considerations in the Study of RNA-Binding Protein-RNA Interactions Genome-wide determination of poly(A) sites in Medicago truncatula: evolutionary conservation of alternative poly(A) site choice.RNA sequencing: from tag-based profiling to resolving complete transcript structure.The Vertebrate Genome Annotation browser 10 years on Loss of MBNL leads to disruption of developmentally regulated alternative polyadenylation in RNA-mediated disease.Improving GENCODE reference gene annotation using a high-stringency proteogenomics workflow.

P2860

Q26744258-0FAC72F3-7A00-45EB-9FD4-E4456458FB04 Q26746120-C5BD1D41-67E8-41AA-9E48-6C3C3B762A99 Q26747608-73BF5950-AA0A-4C0A-893A-672055CB0B91 Q26773038-6E801018-0337-4FD5-8996-FCDA578D4F6A Q26852725-555464B3-55EC-429D-9140-B78A986B4613 Q26864222-08E131FD-B0A3-493D-9E64-972D9BD80E1A Q26998409-4225627A-C45C-4B9E-ABF0-DE5D1F39F5B0 Q27000416-ACBB2C4D-8302-42BC-B10C-06F8056F2188 Q27301936-CB972984-9908-4FD1-98A0-3BA88A704C67 Q27323252-DD070291-7283-45D6-BD01-C6274D55CE31 Q28087216-9256EC95-1D48-46F4-9848-5CAF2C4C7D20 Q28267771-46520DF2-2208-416F-BB6F-5B1000F27700 Q28572013-58F2F4FF-12FF-42DA-A8A2-1846FD0F2D40 Q28603064-BF219BF0-FDCC-44B5-B8A4-D6E500A7EF40 Q28709521-BBFFA0AC-C280-4EB6-AF6D-749CD04861A4 Q30489603-753AAA7D-1428-4ED2-B3DA-FB0A7CB4846C Q31112743-22CBC95C-E54C-4961-A79B-AADE2C7CF746 Q31116138-77F52730-161C-47B8-AE15-1E202F416F66 Q31118239-A765C88A-5811-4F5A-AB46-39F10E8F19A4 Q31140846-91CEFA71-4BB9-48F0-877A-733A5D22737D Q33599755-2B9297F9-826B-4A2E-B651-E9DF393CEEB5 Q33608707-9D320427-6330-4E78-85F1-4D7271F1DFE9 Q33621511-8E4CF448-F277-48D1-8DDE-24DB6B167162 Q33637731-987C3048-012D-4270-B62E-0D023EE7A491 Q33707175-82673083-859C-4443-9D39-B9D06F758DF9 Q33737782-9486E5F2-5FF9-41B5-B576-AECF0783FEE2 Q33741801-B199D215-90EC-4FC1-A45F-3D558A62B265 Q33753679-ED4D1D17-1CC6-46D9-9323-0063FD45DC90 Q33773060-A2FB08FB-62AB-4A33-846F-E59C3BC8DBD5 Q33791162-924A7130-3E6C-4471-8CB9-4EDC1B4184BA Q33793219-DD605115-B50F-43B9-BCF4-7D65ACDF6940 Q33812265-E41CAE9C-7CFC-4155-B67C-DDE8E3ED1644 Q33826903-4E2FD11F-929F-47A1-B953-82E9A9A941AB Q33832891-D399EDD7-AFE5-4470-AB35-D706C2494FAD Q33923485-15C8A99A-35CA-464A-8016-0D7674A9F71E Q33984553-D14B7891-3040-41D6-9192-C0FA6751180C Q34085158-97F3803D-DB17-4E50-9AB1-9712EC4AAAA3 Q34390458-04A8405E-E120-4EFC-8E78-6CC0D3B59565 Q34473863-5A3EA380-5B06-4C33-8DD6-C3C117A8983D Q34529175-341BF759-D0D3-459B-A03D-9BE25FD103B0

P2860

A quantitative atlas of polyadenylation in five mammals.

http://www.wikidata.org/entity/Q36021683

description

2012 nî lūn-bûn

@nan

2012年の論文

@ja

2012年論文

@yue

2012年論文

@zh-hant

2012年論文

@zh-hk

2012年論文

@zh-mo

2012年論文

@zh-tw

2012年论文

@wuu

2012年论文

@zh

2012年论文

@zh-cn

name

A quantitative atlas of polyadenylation in five mammals.

@ast

A quantitative atlas of polyadenylation in five mammals.

@en

type

label

A quantitative atlas of polyadenylation in five mammals.

@ast

A quantitative atlas of polyadenylation in five mammals.

@en

prefLabel

A quantitative atlas of polyadenylation in five mammals.

@ast

A quantitative atlas of polyadenylation in five mammals.

@en

P1433

Q36021683-D825DDE2-383F-4B81-887D-3925266F1DE7

P1476

Q36021683-7E78E870-18FA-4AEC-A286-E985F337040E

P2093

Q36021683-03A0EA3B-2238-4500-97C2-F0005CE4CB58

Q36021683-204861C3-F54C-4C52-8693-2D2819239578

Q36021683-27971D1F-6F0A-47B5-9B63-77D52FA501ED

Q36021683-533FE4DB-7463-4F99-850E-B96793DC99D1

Q36021683-59B6D0C5-1EA5-458B-9CC8-DA17D93BCFD6

Q36021683-8AD10EB1-69F2-4188-A3A4-857F8AC1998E

Q36021683-9F4F47E9-84CC-49A6-8013-81A53F3A6B32

Q36021683-CBA0418C-91C0-4361-8E8B-10382ED41ACA

Q36021683-DCDEA3B0-57CC-4EE2-997D-D38660320310

P2860

Q36021683-04E25CEE-9E5D-4550-BDE5-5631B6CDE54B

Q36021683-0B0DD1FA-F320-43DD-9EB8-AA595769B09A

Q36021683-0B9869D6-7AB2-4F74-AF1B-B550F7E90047

Q36021683-121EF8A2-DD39-4B36-A92F-2CB060CC4EB2

Q36021683-14C79FB2-59AA-4608-94DE-BAB58A546BEE

Q36021683-17705359-B8FA-48B5-9095-C071FBCF843D

Q36021683-1AAD5AA9-E9AF-4F70-8542-5DCE9A2B9BCD

Q36021683-2655C206-CD90-44EF-B037-ED190F46935B

Q36021683-35F74C4F-2266-43C6-8DFF-4ADC2D419C9A

Q36021683-3A775101-35AE-4158-8726-412434E742CD

P304

Q36021683-97316CA3-C3F3-400C-8A48-A0CE9E055103

P31

Q36021683-2435007F-9012-46C7-AC9B-273AA933A47D

P356

Q36021683-1969251B-030D-4627-BA1F-CAE041C5BA3C

P433

Q36021683-9A80CB0D-91B8-42BB-93BB-7104E21D8A0C

P478

Q36021683-11BB4EFD-E00E-4C5E-9376-6917E2B50AC5

P577

Q36021683-96DC5D0D-94DA-4AA6-9D2D-A48B3B25F8A5

P5875

Q36021683-FBCCE8AC-92F6-4C17-9897-625492E30C7B

P698

Q36021683-BA29459C-3660-40ED-85E6-F76C5E2A371C

P932

Q36021683-7B05A948-AFBA-4325-BD9E-59A188578697

P356

P1433

Genome Research

P1476

A quantitative atlas of polyadenylation in five mammals.

@en

P2093

Adnan Derti

http://www.w3.org/2001/XMLSchema#string

Carol A Rohl

http://www.w3.org/2001/XMLSchema#string

Jason M Johnson

http://www.w3.org/2001/XMLSchema#string

Kenzie D Macisaac

http://www.w3.org/2001/XMLSchema#string

Philip Garrett-Engele

http://www.w3.org/2001/XMLSchema#string

Richard C Stevens

http://www.w3.org/2001/XMLSchema#string

Ronghua Chen

http://www.w3.org/2001/XMLSchema#string

Shreedharan Sriram

http://www.w3.org/2001/XMLSchema#string

Tomas Babak

http://www.w3.org/2001/XMLSchema#string

P2860

Most "dark matter" transcripts are associated with known genes

Mapping and quantifying mammalian transcriptomes by RNA-Seq

Addition of poly(A) and poly(A)-rich tails during RNA degradation in the cytoplasm of human cells

RNA-Seq: a revolutionary tool for transcriptomics

The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements

Formation, regulation and evolution of Caenorhabditis elegans 3'UTRs

Patterns of variant polyadenylation signal usage in human genes

The UCSC Genome Browser database: update 2011

HITS-CLIP yields genome-wide insights into brain alternative RNA processing

P304

1173-1183

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P356

10.1101/GR.132563.111

http://www.w3.org/2001/XMLSchema#string

P433

6

http://www.w3.org/2001/XMLSchema#string

P478

22

http://www.w3.org/2001/XMLSchema#string

P577

2012-03-27T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

221979187

http://www.w3.org/2001/XMLSchema#string

P698

22454233

http://www.w3.org/2001/XMLSchema#string

P932

3371698

http://www.w3.org/2001/XMLSchema#string