Open-Source Sequence Clustering Methods Improve the State Of the Art. - Test2 - elhamkhani - TriplyDB

Open-Source Sequence Clustering Methods Improve the State Of the Art.

Open-Source Sequence Clustering Methods Improve the State Of the Art.

http://www.wikidata.org/entity/Q36185149

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Host-Microbiome Interaction and Cancer: Potential Application in Precision Medicine Flowers and Wild Megachilid Bees Share Microbes.Increasing dietary nitrate has no effect on cancellous bone loss or fecal microbiome in ovariectomized rats.Performing Skin Microbiome Research: A Method to the Madness Assessment of Common and Emerging Bioinformatics Pipelines for Targeted Metagenomics OptiClust, an Improved Method for Assigning Amplicon-Based Sequence Data to Operational Taxonomic Units.Aging and serum MCP-1 are associated with gut microbiome composition in a murine model.A comprehensive evaluation of the sl1p pipeline for 16S rRNA gene sequencing analysis.A clinician's guide to microbiome analysis.Exact sequence variants should replace operational taxonomic units in marker-gene data analysis.Exploring the Ecological Coherence between the Spatial and Temporal Patterns of Bacterioplankton in Boreal Lakes.A heritability-based comparison of methods used to cluster 16S rRNA gene sequences into operational taxonomic units.High-resolution characterization of the human microbiome.Critical Issues in Mycobiota Analysis.Experimental metagenomics and ribosomal profiling of the human skin microbiome.Gut microbiota from multiple sclerosis patients enables spontaneous autoimmune encephalomyelitis in mice.Strain diversity and host specificity in a specialized gut symbiont of honeybees and bumblebees.MATAM: reconstruction of phylogenetic marker genes from short sequencing reads in metagenomes.Metagenome sequence clustering with hash-based canopies.FROGS: Find, Rapidly, OTUs with Galaxy Solution.A review of methods and databases for metagenomic classification and assembly.Moving beyond de novo clustering in fungal community ecology.Influence of pig farming on the human's nasal microbiota: The key role of the airborne microbial communities.Using pseudoalignment and base quality to accurately quantify microbial community composition.Bioinformatics for Microbiome Research: Concepts, Strategies, and Advances Experimentally induced metamorphosis in highly regenerative axolotl (ambystoma mexicanum) under constant diet restructures microbiota Impact of DNA Sequencing and Analysis Methods on 16S rRNA Gene Bacterial Community Analysis of Dairy Products Multiple Sclerosis-Associated Changes in the Composition and Immune Functions of Spore-Forming Bacteria

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P2860

Open-Source Sequence Clustering Methods Improve the State Of the Art.

http://www.wikidata.org/entity/Q36185149

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2016 nî lūn-bûn

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2016年の論文

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2016年論文

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2016年論文

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2016年論文

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2016年論文

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2016年論文

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2016年论文

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2016年论文

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2016年论文

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Open-Source Sequence Clustering Methods Improve the State Of the Art.

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Open-Source Sequence Clustering Methods Improve the State Of the Art.

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Open-Source Sequence Clustering Methods Improve the State Of the Art.

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Open-Source Sequence Clustering Methods Improve the State Of the Art.

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Open-Source Sequence Clustering Methods Improve the State Of the Art.

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Open-Source Sequence Clustering Methods Improve the State Of the Art.

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Open-Source Sequence Clustering Methods Improve the State Of the Art

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Céline Mercier

http://www.w3.org/2001/XMLSchema#string

Evguenia Kopylova

http://www.w3.org/2001/XMLSchema#string

Frédéric Mahé

http://www.w3.org/2001/XMLSchema#string

Hong-Wei Zhou

http://www.w3.org/2001/XMLSchema#string

J Gregory Caporaso

http://www.w3.org/2001/XMLSchema#string

Jose A Navas-Molina

http://www.w3.org/2001/XMLSchema#string

Rob Knight

http://www.w3.org/2001/XMLSchema#string

Zhenjiang Zech Xu

http://www.w3.org/2001/XMLSchema#string

P2860

A framework for human microbiome research

Human gut microbiome viewed across age and geography

QIIME allows analysis of high-throughput community sequencing data

Structure, function and diversity of the healthy human microbiome

Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

Basic local alignment search tool

The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

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scholarly article

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10.1128/MSYSTEMS.00003-15

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1

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Torbjørn Rognes

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2016-01-01T00:00:00Z

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27822515

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open-source software

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5069751

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