In silico method for modelling metabolism and gene product expression at genome scale. - Test2 - elhamkhani - TriplyDB

In silico method for modelling metabolism and gene product expression at genome scale.

In silico method for modelling metabolism and gene product expression at genome scale.

http://www.wikidata.org/entity/Q37307600

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The genome organization of Thermotoga maritima reflects its lifestyle The evolution of genome-scale models of cancer metabolism Systems biology of the structural proteome Metabolic Network Modeling of Microbial Interactions in Natural and Engineered Environmental Systems Constraint Based Modeling Going Multicellular Systems Biology of Microbial Exopolysaccharides Production Systems Biology Approaches to Understand Natural Products Biosynthesis Synthetic Ecology of Microbes: Mathematical Models and Applications Analytics for Metabolic Engineering Computational approaches for understanding energy metabolism Computing the functional proteome: recent progress and future prospects for genome-scale models Data-driven integration of genome-scale regulatory and metabolic network models Using Genome-scale Models to Predict Biological Capabilities Reconstruction and validation of a genome-scale metabolic model for the filamentous fungus Neurospora crassa using FARM Simulating Serial-Target Antibacterial Drug Synergies Using Flux Balance Analysis Integrated network analysis and effective tools in plant systems biology.Multi-omics integration accurately predicts cellular state in unexplored conditions for Escherichia coli Reconciling a Salmonella enterica metabolic model with experimental data confirms that overexpression of the glyoxylate shunt can rescue a lethal ppc deletion mutant Principles of proteome allocation are revealed using proteomic data and genome-scale models.Determining the control circuitry of redox metabolism at the genome-scale.Maximal sum of metabolic exchange fluxes outperforms biomass yield as a predictor of growth rate of microorganisms.Reconstruction and modeling protein translocation and compartmentalization in Escherichia coli at the genome-scale.Analysis of omics data with genome-scale models of metabolism.Phenotype-based cell-specific metabolic modeling reveals metabolic liabilities of cancer.Improving collaboration by standardization efforts in systems biology.Parallel exploitation of diverse host nutrients enhances Salmonella virulence.Integration of a constraint-based metabolic model of Brassica napus developing seeds with (13)C-metabolic flux analysis.COBRApy: COnstraints-Based Reconstruction and Analysis for Python Rosen's (M,R) system in process algebra.Proteomics-based metabolic modeling and characterization of the cellulolytic bacterium Thermobifida fusca.Cyanobacteria as photosynthetic biocatalysts: a systems biology perspective.Amino Acid Flux from Metabolic Network Benefits Protein Translation: the Role of Resource Availability.Transparency in metabolic network reconstruction enables scalable biological discovery Constrained Allocation Flux Balance Analysis Toward a Whole-Cell Model of Ribosome Biogenesis: Kinetic Modeling of SSU Assembly.Cell scale host-pathogen modeling: another branch in the evolution of constraint-based methods.solveME: fast and reliable solution of nonlinear ME models Fostering synergy between cell biology and systems biology.Translation of Genotype to Phenotype by a Hierarchy of Cell Subsystems Global Rebalancing of Cellular Resources by Pleiotropic Point Mutations Illustrates a Multi-scale Mechanism of Adaptive Evolution.

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In silico method for modelling metabolism and gene product expression at genome scale.

http://www.wikidata.org/entity/Q37307600

description

article científic

@ca

article scientifique

@fr

articolo scientifico

@it

artigo científico

@pt

bilimsel makale

@tr

scientific article published on 03 July 2012

@en

vedecký článok

@sk

vetenskaplig artikel

@sv

videnskabelig artikel

@da

vědecký článek

@cs

name

In silico method for modelling metabolism and gene product expression at genome scale.

@en

In silico method for modelling metabolism and gene product expression at genome scale.

@nl

type

label

In silico method for modelling metabolism and gene product expression at genome scale.

@en

In silico method for modelling metabolism and gene product expression at genome scale.

@nl

prefLabel

In silico method for modelling metabolism and gene product expression at genome scale.

@en

In silico method for modelling metabolism and gene product expression at genome scale.

@nl

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Nature Communications

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In silico method for modelling metabolism and gene product expression at genome scale.

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Alexandra C Schrimpe-Rutledge

http://www.w3.org/2001/XMLSchema#string

Daniel R Hyduke

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Haythem Latif

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Jeffrey D Orth

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Vasiliy A Portnoy

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P2860

The RAST Server: rapid annotations using subsystems technology

Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima

KEGG: kyoto encyclopedia of genes and genomes

DBD: a transcription factor prediction database.

The Universal Protein Resource (UniProt): an expanding universe of protein information.

5S Ribosomal RNA Database

The RCSB Protein Data Bank: redesigned web site and web services

Synthetic biology: new engineering rules for an emerging discipline

The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes

Clustal W and Clustal X version 2.0

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scholarly article

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10.1038/NCOMMS1928

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3

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Nathan E. Lewis

Joshua A. Lerman

Karsten Zengler

Joshua N Adkins

Bernhard Palsson

Richard D. Smith

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2012-07-03T00:00:00Z

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