A knowledge-based scoring function for protein-RNA interactions derived from a statistical mechanics-based iterative method
about
NPDock: a web server for protein-nucleic acid dockingFully Blind Docking at the Atomic Level for Protein-Peptide Complex Structure PredictionUsing 3dRPC for RNA-protein complex structure prediction.A non-redundant protein-RNA docking benchmark version 2.0.Challenges, applications, and recent advances of protein-ligand docking in structure-based drug design.Protein-RNA complexes and efficient automatic docking: expanding RosettaDock possibilities.Template-Based Modeling of Protein-RNA InteractionsA pair-conformation-dependent scoring function for evaluating 3D RNA-protein complex structures.Predicting 3D Structure, Flexibility, and Stability of RNA Hairpins in Monovalent and Divalent Ion SolutionsConserved Functional Motifs and Homology Modeling to Predict Hidden Moonlighting Functional Sites.Protein-RNA interactions: structural biology and computational modeling techniques.A Graph Approach to Mining Biological Patterns in the Binding Interfaces.RRDB: A comprehensive and nonredundant benchmark for RNA-RNA docking and scoring.3dRPC: A web server for 3D RNA-protein structure prediction.HDOCK: a web server for protein-protein and protein-DNA/RNA docking based on a hybrid strategy.Incorporating specificity into optimization: evaluation of SPA using CSAR 2014 and CASF 2013 benchmarks.A combinatorial scoring function for protein-RNA docking.Optimizing the affinity and specificity of ligand binding with the inclusion of solvation effect.Determination of an effective scoring function for RNA-RNA interactions with a physics-based double-iterative method.Assessing the performance of MM/PBSA and MM/GBSA methods. 8. Predicting binding free energies and poses of protein-RNA complexesBioinformatics Tools and Benchmarks for Computational Docking and 3D Structure Prediction of RNA-Protein Complexes
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P2860
A knowledge-based scoring function for protein-RNA interactions derived from a statistical mechanics-based iterative method
description
article científic
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article scientifique
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articolo scientifico
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artigo científico
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bilimsel makale
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scientific article published on 29 January 2014
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vedecký článok
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vetenskaplig artikel
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videnskabelig artikel
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vědecký článek
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name
A knowledge-based scoring func ...... chanics-based iterative method
@en
A knowledge-based scoring func ...... hanics-based iterative method.
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type
label
A knowledge-based scoring func ...... chanics-based iterative method
@en
A knowledge-based scoring func ...... hanics-based iterative method.
@nl
prefLabel
A knowledge-based scoring func ...... chanics-based iterative method
@en
A knowledge-based scoring func ...... hanics-based iterative method.
@nl
P2860
P356
P1476
A knowledge-based scoring func ...... chanics-based iterative method
@en
P2093
Sheng-You Huang
Xiaoqin Zou
P2860
P356
10.1093/NAR/GKU077
P407
P577
2014-01-29T00:00:00Z