Homeostatic regulation of supercoiling sensitivity coordinates transcription of the bacterial genome. - Test2 - elhamkhani - TriplyDB

Homeostatic regulation of supercoiling sensitivity coordinates transcription of the bacterial genome.

Homeostatic regulation of supercoiling sensitivity coordinates transcription of the bacterial genome.

http://www.wikidata.org/entity/Q38312050

about

DNA thermodynamics shape chromosome organization and topology H-NS forms a superhelical protein scaffold for DNA condensation Cooperative DnaA Binding to the Negatively Supercoiled datA Locus Stimulates DnaA-ATP Hydrolysis.Prediction of highly expressed genes in microbes based on chromatin accessibility.Dissecting the logical types of network control in gene expression profiles.The HU regulon is composed of genes responding to anaerobiosis, acid stress, high osmolarity and SOS induction.Ranges of control in the transcriptional regulation of Escherichia coli.Patterns of subnet usage reveal distinct scales of regulation in the transcriptional regulatory network of Escherichia coli.Analog regulation of metabolic demand.The dpsA gene of Streptomyces coelicolor: induction of expression from a single promoter in response to environmental stress or during development The yin and yang of yeast transcription: elements of a global feedback system between metabolism and chromatin.Genomic analysis of the regulatory elements and links with intrinsic DNA structural properties in the shrunken genome of Buchnera.Topoisomerase I function during Escherichia coli response to antibiotics and stress enhances cell killing from stabilization of its cleavage complex.Structural coupling between RNA polymerase composition and DNA supercoiling in coordinating transcription: a global role for the omega subunit?Altering gene expression by aminocoumarins: the role of DNA supercoiling in Staphylococcus aureus.All tangled up: how cells direct, manage and exploit topoisomerase function.Role of global and local topology in the regulation of gene expression in Streptococcus pneumoniae.Conversion of commensal Escherichia coli K-12 to an invasive form via expression of a mutant histone-like protein.Upstream binding of idling RNA polymerase modulates transcription initiation from a nearby promoter The nucleoid as a smart polymer.Chromosomal "stress-response" domains govern the spatiotemporal expression of the bacterial virulence program.Gene order and chromosome dynamics coordinate spatiotemporal gene expression during the bacterial growth cycle.Conserved Units of Co-Expression in Bacterial Genomes: An Evolutionary Insight into Transcriptional Regulation The nucleoid-associated proteins H-NS and FIS modulate the DNA supercoiling response of the pel genes, the major virulence factors in the plant pathogen bacterium Dickeya dadantii.Circadian rhythms of superhelical status of DNA in cyanobacteria.On the mutational topology of the bacterial genome.New insights into transcriptional regulation by H-NS Genome-wide analysis of Fis binding in Escherichia coli indicates a causative role for A-/AT-tracts.A common topology for bacterial and eukaryotic transcription initiation?Genome scale patterns of supercoiling in a bacterial chromosome.DNA supercoiling inhibits DNA knotting.Bullied no more: when and how DNA shoves proteins around.Analysis of phage Mu DNA transposition by whole-genome Escherichia coli tiling arrays reveals a complex relationship to distribution of target selection protein B, transcription and chromosome architectural elements.Bacterial DNA topology and infectious disease.Regulation by transcription factors in bacteria: beyond description DNA bridging and antibridging: a role for bacterial nucleoid-associated proteins in regulating the expression of laterally acquired genes.Bacterial transcriptomics: what is beyond the RNA horiz-ome?Integration of syntactic and semantic properties of the DNA code reveals chromosomes as thermodynamic machines converting energy into information.Dickeya ecology, environment sensing and regulation of virulence programme.Gene clusters reflecting macrodomain structure respond to nucleoid perturbations.

P2860

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P2860

Homeostatic regulation of supercoiling sensitivity coordinates transcription of the bacterial genome.

http://www.wikidata.org/entity/Q38312050

description

2006 nî lūn-bûn

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Homeostatic regulation of supe ...... ption of the bacterial genome.

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Homeostatic regulation of supe ...... ption of the bacterial genome.

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Homeostatic regulation of supe ...... ption of the bacterial genome.

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Andrew Travers

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Georgi Muskhelishvili

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Marcel Geertz

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Nicolas Blot

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Ramesh Mavathur

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P2860

The role of nucleoid-associated proteins in the organization and compaction of bacterial chromatin

Chromatin architecture and gene expression in Escherichia coli

Spatial patterns of transcriptional activity in the chromosome of Escherichia coli

Genomic transcriptional response to loss of chromosomal supercoiling in Escherichia coli

The chromatin-associated protein H-NS interacts with curved DNA to influence DNA topology and gene expression

The dynamic response of upstream DNA to transcription-generated torsional stress

Functional genomics: expression analysis of Escherichia coli growing on minimal and rich media.

Measuring chromosome dynamics on different time scales using resolvases with varying half-lives.

Long-term experimental evolution in Escherichia coli. XII. DNA topology as a key target of selection.

DNA topology-mediated control of global gene expression in Escherichia coli.

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