Binding sites for metabolic disease related transcription factors inferred at base pair resolution by chromatin immunoprecipitation and genomic microarrays.
about
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot projectDifferential binding and co-binding pattern of FOXA1 and FOXA3 and their relation to H3K4me3 in HepG2 cells revealed by ChIP-seqGenome wide prediction of HNF4alpha functional binding sites by the use of local and global sequence contextTranscription factors bind thousands of active and inactive regions in the Drosophila blastodermSpecies-specific transcription in mice carrying human chromosome 21Architectural roles of multiple chromatin insulators at the human apolipoprotein gene clusterDAX-1 acts as a novel corepressor of orphan nuclear receptor HNF4alpha and negatively regulates gluconeogenic enzyme gene expressionGenome-wide location analysis reveals distinct transcriptional circuitry by paralogous regulators Foxa1 and Foxa2Identification of DNA-dependent protein kinase as a cofactor for the forkhead transcription factor FoxA2Network insights into the genes regulated by hepatocyte nuclear factor 4 in response to drug induced perturbations: a reviewAlterations of epigenetic signatures in hepatocyte nuclear factor 4α deficient mouse liver determined by improved ChIP-qPCR and (h)MeDIP-qPCR assays.Practical strategies for discovering regulatory DNA sequence motifs.Genome-scale validation of deep-sequencing libraries.Identification of interacting transcription factors regulating tissue gene expression in humanExpression profile analysis of the inflammatory response regulated by hepatocyte nuclear factor 4αA high resolution genome-wide scan of HNF4α recognition sites infers a regulatory gene network in colon cancer.Chromatin immunoprecipitation and microarray-based analysis of protein locationIntegrative epigenomic and genomic analysis of malignant pheochromocytoma.Cancer associated epigenetic transitions identified by genome-wide histone methylation binding profiles in human colorectal cancer samples and paired normal mucosaDetection of interacting transcription factors in human tissues using predicted DNA binding affinity.Proteomic analysis of native hepatocyte nuclear factor-4α (HNF4α) isoforms, phosphorylation status, and interactive cofactors.Foxa2-dependent hepatic gene regulatory networks depend on physiological stateHepatocyte nuclear factor 4alpha orchestrates expression of cell adhesion proteins during the epithelial transformation of the developing liverFinding subtypes of transcription factor motif pairs with distinct regulatory rolesEnhancers regulate progression of development in mammalian cellsIn vitro analysis of DNA-protein interactions by proximity ligation.Butyrate mediates decrease of histone acetylation centered on transcription start sites and down-regulation of associated genesWhole-genome maps of USF1 and USF2 binding and histone H3 acetylation reveal new aspects of promoter structure and candidate genes for common human disordersUnraveling the complex genetics of familial combined hyperlipidemia.Liver-specific hepatocyte nuclear factor-4alpha deficiency: greater impact on gene expression in male than in female mouse liver.Integrated approach for the identification of human hepatocyte nuclear factor 4alpha target genes using protein binding microarrays.Cis-regulatory modules in the mammalian liver: composition depends on strength of Foxa2 consensus site.Global analysis of in vivo Foxa2-binding sites in mouse adult liver using massively parallel sequencingChIPping away at gene regulationDevelopmental roles of 21 Drosophila transcription factors are determined by quantitative differences in binding to an overlapping set of thousands of genomic regionsMapping key features of transcriptional regulatory circuitry in embryonic stem cells.A general integrative genomic feature transcription factor binding site prediction method applied to analysis of USF1 binding in cardiovascular diseaseIdentification of candidate regulatory SNPs by combination of transcription-factor-binding site prediction, SNP genotyping and haploChIPNovel genes in cell cycle control and lipid metabolism with dynamically regulated binding sites for sterol regulatory element-binding protein 1 and RNA polymerase II in HepG2 cells detected by chromatin immunoprecipitation with microarray detection.β3-chimaerin, a novel member of the chimaerin Rac-GAP family.
P2860
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P2860
Binding sites for metabolic disease related transcription factors inferred at base pair resolution by chromatin immunoprecipitation and genomic microarrays.
description
2005 nî lūn-bûn
@nan
2005年の論文
@ja
2005年学术文章
@wuu
2005年学术文章
@zh-cn
2005年学术文章
@zh-hans
2005年学术文章
@zh-my
2005年学术文章
@zh-sg
2005年學術文章
@yue
2005年學術文章
@zh
2005年學術文章
@zh-hant
name
Binding sites for metabolic di ...... ation and genomic microarrays.
@en
type
label
Binding sites for metabolic di ...... ation and genomic microarrays.
@en
prefLabel
Binding sites for metabolic di ...... ation and genomic microarrays.
@en
P2093
P2860
P50
P356
P1476
Binding sites for metabolic di ...... ation and genomic microarrays.
@en
P2093
Christoph Koch
Claes Wadelius
Gayle Clelland
Jan Komorowski
Keith James
Kenneth Wester
Nigel Carter
Oliver M Dovey
Pawandeep Dhami
Peter D Ellis
P2860
P304
P356
10.1093/HMG/DDI378
P50
P577
2005-10-12T00:00:00Z