about
Small Molecule Subgraph Detector (SMSD) toolkitExploring the biological and chemical complexity of the ligasesChemical Markup, XML, and the World Wide Web. 6. CMLReact, an XML Vocabulary for Chemical ReactionsMACiE: a database of enzyme reaction mechanismsEC-BLAST: a tool to automatically search and compare enzyme reactionsReaction Decoder Tool (RDT): extracting features from chemical reactionsMACiE: exploring the diversity of biochemical reactionsMACiE (Mechanism, Annotation and Classification in Enzymes): novel tools for searching catalytic mechanismsKey challenges for the creation and maintenance of specialist protein resourcesThe Confidence Information Ontology: a step towards a standard for asserting confidence in annotationsThe Catalytic Site Atlas 2.0: cataloging catalytic sites and residues identified in enzymes.Biocuration in the structure-function linkage database: the anatomy of a superfamilyThe CoFactor database: organic cofactors in enzyme catalysis.Exploring the evolution of novel enzyme functions within structurally defined protein superfamilies.The EBI enzyme portalCreating a specialist protein resource network: a meeting report for the protein bioinformatics and community resources retreatInterPro in 2017-beyond protein family and domain annotations.The geometry of interactions between catalytic residues and their substrates.[FeFe]-hydrogenase maturation: insights into the role HydE plays in dithiomethylamine biosynthesis.Evolution of enzymes and pathways for the biosynthesis of cofactors.The Structure-Function Linkage DatabaseThe structures and physicochemical properties of organic cofactors in biocatalysis.Characterizing the complexity of enzymes on the basis of their mechanisms and structures with a bio-computational analysis.Evaluating Functional Annotations of Enzymes Using the Gene Ontology.FunTree: a resource for exploring the functional evolution of structurally defined enzyme superfamilies.Using reaction mechanism to measure enzyme similarity.Understanding the functional roles of amino acid residues in enzyme catalysis.A global view of structure-function relationships in the tautomerase superfamily.Mechanism and Catalytic Site Atlas (M-CSA): a database of enzyme reaction mechanisms and active sites.Metal ions in biological catalysis: from enzyme databases to general principles.The chemistry of protein catalysis.Biocuration in the structure-function linkage database: the anatomy of a superfamily.Metal-MACiE: a database of metals involved in biological catalysisThe NAD Binding Domain and the Short-Chain Dehydrogenase/Reductase (SDR) SuperfamilyChemInform Abstract: Evolution of Enzymes and Pathways for the Biosynthesis of CofactorsFirst examples of M–Se–P–N–N heterocyclesAtlas of the Radical SAM Superfamily: Divergent Evolution of Function Using a “Plug and Play” DomainA global analysis of function and conservation of catalytic residues in enzymes
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description
hulumtuese
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researcher
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wetenschapper
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հետազոտող
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Gemma L Holliday
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Gemma L Holliday
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Gemma L. Holliday
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Gemma L. Holliday
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Gemma L Holliday
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Gemma L Holliday
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Gemma L. Holliday
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Gemma L. Holliday
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Gemma L Holliday
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Gemma L Holliday
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Gemma L. Holliday
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Gemma L. Holliday
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0000-0002-6731-6398