Topological and energetic factors: what determines the structural details of the transition state ensemble and "en-route" intermediates for protein folding? An investigation for small globular proteins.
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A Stevedore's protein knotBSDB: the biomolecule stretching databaseConformational transitions of adenylate kinase: switching by crackingProtein folding: then and nowSequence co-evolutionary information is a natural partner to minimally-frustrated models of biomolecular dynamicsMD Simulations of tRNA and Aminoacyl-tRNA Synthetases: Dynamics, Folding, Binding, and Allosteryp53 dynamics upon response element recognition explored by molecular simulations.Polymer uncrossing and knotting in protein folding, and their role in minimal folding pathwaysFrom residue coevolution to protein conformational ensembles and functional dynamics.Coarse-grained molecular simulation of epidermal growth factor receptor protein tyrosine kinase multi-site self-phosphorylationStructure-based molecular simulations reveal the enhancement of biased Brownian motions in single-headed kinesinThe origin of minus-end directionality and mechanochemistry of Ncd motorsSteric interactions lead to collective tilting motion in the ribosome during mRNA-tRNA translocationDiffusion, crowding & protein stability in a dynamic molecular model of the bacterial cytoplasmOrigins of Chevron Rollovers in Non-Two-State Protein Folding KineticsUnspecific hydrophobic stabilization of folding transition statesSolvation in protein folding analysis: Combination of theoretical and experimental approachesTheoretical and experimental demonstration of the importance of specific nonnative interactions in protein foldingThe High-Resolution NMR Structure of the Early Folding Intermediate of the Thermus thermophilus Ribonuclease HNonnative Interactions in the FF Domain Folding Pathway from an Atomic Resolution Structure of a Sparsely Populated Intermediate: An NMR Relaxation Dispersion StudyAllostery in the ferredoxin protein motif does not involve a conformational switchAllosteric control in a metalloprotein dramatically alters function.Snapshots of a protein folding intermediateThe protein folding problemSingle transcriptional and translational preQ1 riboswitches adopt similar pre-folded ensembles that follow distinct folding pathways into the same ligand-bound structureProtein stability and dynamics modulation: the case of human frataxinStrain Mediated Adaptation Is Key for Myosin Mechanochemistry: Discovering General Rules for Motor ActivitySimulations of proteins with inhomogeneous degrees of freedom: The effect of thermostatsConstructing sequence-dependent protein models using coevolutionary information.The dominant folding route minimizes backbone distortion in SH3.Substrate-specific reorganization of the conformational ensemble of CSK implicates novel modes of kinase functionKinetic consequences of native state optimization of surface-exposed electrostatic interactions in the Fyn SH3 domain.Interdomain Contacts Control Native State Switching of RfaH on a Dual-Funneled LandscapeConstraining local structure can speed up folding by promoting structural polarization of the folding pathwayProteins at work: a combined small angle X-RAY scattering and theoretical determination of the multiple structures involved on the protein kinase functional landscapeUnderstanding protein folding cooperativity based on topological consideration.An all-atom structure-based potential for proteins: bridging minimal models with all-atom empirical forcefields.Folding of proteins with an all-atom Go-model.Effect of glycosylation on protein folding: a close look at thermodynamic stabilization.Similarity and difference in the unfolding of thermophilic and mesophilic cold shock proteins studied by molecular dynamics simulations
P2860
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P2860
Topological and energetic factors: what determines the structural details of the transition state ensemble and "en-route" intermediates for protein folding? An investigation for small globular proteins.
description
2000 nî lūn-bûn
@nan
2000年の論文
@ja
2000年論文
@yue
2000年論文
@zh-hant
2000年論文
@zh-hk
2000年論文
@zh-mo
2000年論文
@zh-tw
2000年论文
@wuu
2000年论文
@zh
2000年论文
@zh-cn
name
Topological and energetic fact ...... n for small globular proteins.
@en
type
label
Topological and energetic fact ...... n for small globular proteins.
@en
prefLabel
Topological and energetic fact ...... n for small globular proteins.
@en
P2093
P356
P1476
Topological and energetic fact ...... n for small globular proteins.
@en
P2093
C Clementi
J N Onuchic
P304
P356
10.1006/JMBI.2000.3693
P407
P577
2000-05-01T00:00:00Z