Pushing the limits of what is achievable in protein-DNA docking: benchmarking HADDOCK's performance.
about
Evolution of Macromolecular Docking Techniques: The Case Study of Nickel and Iron Metabolism in Pathogenic BacteriaOn docking, scoring and assessing protein-DNA complexes in a rigid-body frameworkPromoter activation by CII, a potent transcriptional activator from bacteriophage 186.Protein-DNA docking with a coarse-grained force field.TFinDit: transcription factor-DNA interaction data depositoryPredicting protein-DNA interactions by full search computational docking.Structure of bacterial transcription factor SpoIIID and evidence for a novel mode of DNA bindingMTMDAT-HADDOCK: high-throughput, protein complex structure modeling based on limited proteolysis and mass spectrometrySolvated protein-DNA docking using HADDOCK.Model of a DNA-protein complex of the architectural monomeric protein MC1 from Euryarchaea.Databases and bioinformatics tools for the study of DNA repair.Benchmarks for flexible and rigid transcription factor-DNA docking.Atomistic modeling of protein-DNA interaction specificity: progress and applications.ACA-specific RNA sequence recognition is acquired via the loop 2 region of MazF mRNA interferase.Nuclear magnetic resonance analysis of protein-DNA interactions.M3: an integrative framework for structure determination of molecular machines.EMQIT: a machine learning approach for energy based PWM matrix quality improvement.ParaDock: a flexible non-specific DNA--rigid protein docking algorithm.A nonredundant structure dataset for benchmarking protein-RNA computational docking.Structural models of protein-DNA complexes based on interface prediction and docking.A knowledge-based orientation potential for transcription factor-DNA docking.Combining NMR and small angle X-ray and neutron scattering in the structural analysis of a ternary protein-RNA complex.Characterization of Protein Tyrosine Phosphatase 1B Inhibition by Chlorogenic Acid and Cichoric Acid.A toolkit and benchmark study for FRET-restrained high-precision structural modeling.Protein-Protein Docking with HADDOCKMolecular Modeling Applied to Nucleic Acid-Based Molecule DevelopmentAdvances in Human Biology: Combining Genetics and Molecular Biophysics to Pave the Way for Personalized Diagnostics and Medicine
P2860
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P2860
Pushing the limits of what is achievable in protein-DNA docking: benchmarking HADDOCK's performance.
description
2010 nî lūn-bûn
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2010年の論文
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2010年論文
@yue
2010年論文
@zh-hant
2010年論文
@zh-hk
2010年論文
@zh-mo
2010年論文
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2010年论文
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2010年论文
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2010年论文
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name
Pushing the limits of what is ...... marking HADDOCK's performance.
@en
type
label
Pushing the limits of what is ...... marking HADDOCK's performance.
@en
prefLabel
Pushing the limits of what is ...... marking HADDOCK's performance.
@en
P2860
P356
P1476
Pushing the limits of what is ...... hmarking HADDOCK's performance
@en
P2093
Alexandre M J J Bonvin
P2860
P304
P356
10.1093/NAR/GKQ222
P577
2010-05-13T00:00:00Z