about
Allele frequency net: a database and online repository for immune gene frequencies in worldwide populationsLibrary of Apicomplexan Metabolic Pathways: a manually curated database for metabolic pathways of apicomplexan parasitesAn analysis of extensible modelling for functional genomics dataAllele frequencies databaseComputational phosphoproteomics: from identification to localizationA tutorial for software development in quantitative proteomics using PSI standard formatsFive years of progress in the Standardization of Proteomics Data 4th Annual Spring Workshop of the HUPO-Proteomics Standards Initiative April 23-25, 2007 Ecole Nationale Supérieure (ENS), Lyon, FranceDevelopment of data representation standards by the human proteome organization proteomics standards initiativeA standardized framing for reporting protein identifications in mzIdentML 1.2jmzTab: a java interface to the mzTab data standardThe mzTab data exchange format: communicating mass-spectrometry-based proteomics and metabolomics experimental results to a wider audiencejmzIdentML API: A Java interface to the mzIdentML standard for peptide and protein identification dataTen years of standardizing proteomic data: a report on the HUPO-PSI Spring Workshop: April 12-14th, 2012, San Diego, USATools (Viewer, Library and Validator) that facilitate use of the peptide and protein identification standard format, termed mzIdentMLThe mzQuantML data standard for mass spectrometry-based quantitative studies in proteomicsThe HUPO proteomics standards initiative- mass spectrometry controlled vocabularyThe mzIdentML data standard for mass spectrometry-based proteomics resultsThe gel electrophoresis markup language (GelML) from the Proteomics Standards InitiativeAn informatic pipeline for the data capture and submission of quantitative proteomic data using iTRAQProteomeXchange provides globally coordinated proteomics data submission and disseminationThe jmzQuantML programming interface and validator for the mzQuantML data standardNumerical compression schemes for proteomics mass spectrometry dataHow to submit MS proteomics data to ProteomeXchange via the PRIDE database.Visualisation and analysis of proteomic data from the procyclic form of Trypanosoma brucei.Allele Frequencies Net Database: Improvements for storage of individual genotypes and analysis of existing data.Capture and analysis of quantitative proteomic data.Proposal for a standard representation of two-dimensional gel electrophoresis data.An update on data standards for gel electrophoresis.Modeling and managing experimental data using FuGE.FuGEFlow: data model and markup language for flow cytometry.The PSI semantic validator: a framework to check MIAPE compliance of proteomics data.XGAP: a uniform and extensible data model and software platform for genotype and phenotype experimentsA DIGE study on the effects of salbutamol on the rat muscle proteome - an exemplar of best practice for data sharing in proteomics.Software for analysing ion mobility mass spectrometry data to improve peptide identification.16(th) IHIW: extending the number of resources and bioinformatics analysis for the investigation of HLA rare alleles.In silico analysis of HLA associations with drug-induced liver injury: use of a HLA-genotyped DNA archive from healthy volunteersA software toolkit and interface for performing stable isotope labeling and top3 quantification using Progenesis LC-MSControlled vocabularies and ontologies in proteomics: overview, principles and practiceAllele frequency net 2015 update: new features for HLA epitopes, KIR and disease and HLA adverse drug reaction associations.ProteoAnnotator--open source proteogenomics annotation software supporting PSI standards.
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P50
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