Multiple modes of Escherichia coli DNA gyrase activity revealed by force and torque. - Test2 - elhamkhani - TriplyDB

Multiple modes of Escherichia coli DNA gyrase activity revealed by force and torque.

Multiple modes of Escherichia coli DNA gyrase activity revealed by force and torque.

http://www.wikidata.org/entity/Q46492608

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Direct observation of strand passage by DNA-topoisomerase and its limited processivity A method to estimate the elastic energy stored in braided DNA molecules using hydrodynamic equations.The ancestral role of ATP hydrolysis in type II topoisomerases: prevention of DNA double-strand breaks.Supercoiling biases the formation of loops involved in gene regulation Helical chirality: a link between local interactions and global topology in DNA Minute negative superhelicity is sufficient to induce the B-Z transition in the presence of low tension Gyramides prevent bacterial growth by inhibiting DNA gyrase and altering chromosome topology.Single-molecule measurements of DNA topology and topoisomerases.Vibrio cholerae ParE2 poisons DNA gyrase via a mechanism distinct from other gyrase inhibitors Solution structures of DNA-bound gyrase.Single-molecule analysis reveals the molecular bearing mechanism of DNA strand exchange by a serine recombinase Robust mechanosensing and tension generation by myosin VI The dimer state of GyrB is an active form: implications for the initial complex assembly and processive strand passage.Local sensing of global DNA topology: from crossover geometry to type II topoisomerase processivity E. coli Gyrase Fails to Negatively Supercoil Diaminopurine-Substituted DNA.The role of ATP-dependent machines in regulating genome topology.DNA self-assembly: from chirality to evolution.Structural insight into negative DNA supercoiling by DNA gyrase, a bacterial type 2A DNA topoisomerase DNA topoisomerases: harnessing and constraining energy to govern chromosome topology.Topoisomerase II: a fitted mechanism for the chromatin landscape.DNA supercoiling during transcription.Structural Dynamics and Mechanochemical Coupling in DNA Gyrase.Magnetic tweezers measurements of the nanomechanical properties of DNA in the presence of drugs.Magnetic tweezers measurements of the nanomechanical stability of DNA against denaturation at various conditions of pH and ionic strength.Growth rate toxicity phenotypes and homeostatic supercoil control differentiate Escherichia coli from Salmonella enterica serovar Typhimurium.ATP binding controls distinct structural transitions of Escherichia coli DNA gyrase in complex with DNA.A unique 45-amino-acid region in the toprim domain of Plasmodium falciparum gyrase B is essential for its activity.Fitness of Streptococcus pneumoniae fluoroquinolone-resistant strains with topoisomerase IV recombinant genes.Toward a molecular understanding of the anisotropic response of proteins to external forces: insights from elastic network models.Direct observation of the translocation mechanism of transcription termination factor Rho.Relationships between the winding angle, the characteristic radius, and the torque for a long polymer chain wound around a cylinder: implications for RNA winding around DNA during transcription.Force fluctuations impact kinetics of biomolecular systems.Model-based genome-wide determination of RNA chain elongation rates in Escherichia coli.Activities of gyrase and topoisomerase IV on positively supercoiled DNA.The fluorescence properties and binding mechanism of SYTOX green, a bright, low photo-damage DNA intercalating agent.Elasticity of cisplatin-bound DNA reveals the degree of cisplatin binding.Why Two? On the Role of (A-)Symmetry in Negative Supercoiling of DNA by Gyrase.Single-molecule study of the DNA denaturation phase transition in the force-torsion space Correction-free force calibration for magnetic tweezers experiments A Guide to Magnetic Tweezers and Their Applications

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P2860

Multiple modes of Escherichia coli DNA gyrase activity revealed by force and torque.

http://www.wikidata.org/entity/Q46492608

description

2007 nî lūn-bûn

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2007年の論文

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2007年学术文章

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2007年学术文章

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2007年学术文章

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2007年学术文章

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2007年学术文章

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2007年学术文章

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2007年學術文章

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2007年學術文章

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name

Multiple modes of Escherichia coli DNA gyrase activity revealed by force and torque.

@en

Multiple modes of Escherichia coli DNA gyrase activity revealed by force and torque.

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type

label

Multiple modes of Escherichia coli DNA gyrase activity revealed by force and torque.

@en

Multiple modes of Escherichia coli DNA gyrase activity revealed by force and torque.

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prefLabel

Multiple modes of Escherichia coli DNA gyrase activity revealed by force and torque.

@en

Multiple modes of Escherichia coli DNA gyrase activity revealed by force and torque.

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Nature Structural & Molecular Biology

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Multiple modes of Escherichia coli DNA gyrase activity revealed by force and torque.

@en

P2093

Jeff Gore

http://www.w3.org/2001/XMLSchema#string

Marcelo Nöllmann

http://www.w3.org/2001/XMLSchema#string

Michael D Stone

http://www.w3.org/2001/XMLSchema#string

Nancy J Crisona

http://www.w3.org/2001/XMLSchema#string

Nicholas R Cozzarelli

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Seok-Cheol Hong

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Sylvain Mitelheiser

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Zev Bryant

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P2860

Cellular roles of dna topoisomerases: a molecular perspective

Stretched and overwound DNA forms a Pauling-like structure with exposed bases

Mechanical processes in biochemistry

Mechanochemical analysis of DNA gyrase using rotor bead tracking.

Chirality sensing by Escherichia coli topoisomerase IV and the mechanism of type II topoisomerases.

DNA gyrase: purification and catalytic properties of a fragment of gyrase B protein

Braiding DNA: experiments, simulations, and models.

The elasticity of a single supercoiled DNA molecule.

Nalidixic acid resistance: a second genetic character involved in DNA gyrase activity.

Contacts between DNA gyrase and its binding site on DNA: features of symmetry and asymmetry revealed by protection from nucleases

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264-271

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scholarly article

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10.1038/NSMB1213

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4

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14

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Carlos Bustamante

Anthony Maxwell

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2007-03-04T00:00:00Z

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6473126

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17334374

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