Annotation error in public databases: misannotation of molecular function in enzyme superfamiliesA gold standard set of mechanistically diverse enzyme superfamilies.A large-scale evaluation of computational protein function predictionThe Enzyme Function Initiative.Discovery of a dipeptide epimerase enzymatic function guided by homology modeling and virtual screeningGlutathione transferases are structural and functional outliers in the thioredoxin foldThe International Gene Trap Consortium Website: a portal to all publicly available gene trap cell lines in mouseHomologous (beta/alpha)8-barrel enzymes that catalyze unrelated reactions: orotidine 5'-monophosphate decarboxylase and 3-keto-L-gulonate 6-phosphate decarboxylaseStability for function trade-offs in the enolase superfamily "catalytic module"Structural diversity within the mononuclear and binuclear active sites of N-acetyl-D-glucosamine-6-phosphate deacetylasePrediction and assignment of function for a divergent N-succinyl amino acid racemaseEvolution of enzymatic activities in the enolase superfamily: D-Mannonate dehydratase from Novosphingobium aromaticivoransEvolution of Enzymatic Activities in the Enolase Superfamily: l -Rhamnonate Dehydratase † ‡Evolution of Enzymatic Activities in the Enolase Superfamily: Stereochemically Distinct Mechanisms in Two Families of cis , cis -Muconate Lactonizing Enzymes † ‡Annotating Enzymes of Uncertain Function: The Deacylation of d -Amino Acids by Members of the Amidohydrolase Superfamily ,Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamilyHomology models guide discovery of diverse enzyme specificities among dipeptide epimerases in the enolase superfamilyStructure-guided discovery of the metabolite carboxy-SAM that modulates tRNA functionDiscovery of new enzymes and metabolic pathways by using structure and genome contextMutations in PNKD causing paroxysmal dyskinesia alters protein cleavage and stabilityD-Ribulose 5-phosphate 3-epimerase: functional and structural relationships to members of the ribulose-phosphate binding (beta/alpha)8-barrel superfamilyEvolution of function in the "two dinucleotide binding domains" flavoproteinsEvolutionarily conserved substrate substructures for automated annotation of enzyme superfamiliesQuantitative comparison of catalytic mechanisms and overall reactions in convergently evolved enzymes: implications for classification of enzyme functionSmCL3, a gastrodermal cysteine protease of the human blood fluke Schistosoma mansoniA mapping of drug space from the viewpoint of small molecule metabolismA global comparison of the human and T. brucei degradomes gives insights about possible parasite drug targetsPrediction and characterization of enzymatic activities guided by sequence similarity and genome neighborhood networksCovalent docking predicts substrates for haloalkanoate dehalogenase superfamily phosphatasesAn expanded evaluation of protein function prediction methods shows an improvement in accuracyKey challenges for the creation and maintenance of specialist protein resourcesUsing sequence similarity networks for visualization of relationships across diverse protein superfamilies.A semiautomated approach to gene discovery through expressed sequence tag data mining: discovery of new human transporter genes.Comparison of methods for genomic localization of gene trap sequencesModeling insertional mutagenesis using gene length and expression in murine embryonic stem cells.Redesigning enzymes based on adaptive evolution for optimal function in synthetic metabolic pathwaysImproving the quality of protein similarity network clustering algorithms using the network edge weight distribution.Biocuration in the structure-function linkage database: the anatomy of a superfamilyEvolutionary potential of (beta/alpha)8-barrels: functional promiscuity produced by single substitutions in the enolase superfamily.Divergent evolution in enolase superfamily: strategies for assigning functions
P50
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P50
description
Professor at the University of California, San Francisco
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wetenschapper
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கலிபோர்னியா பல்கலைக்கழக பேராசிரியர்
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name
Patricia Babbitt
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Patricia Babbitt
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Patricia Babbitt
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Patricia Babbitt
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Patricia Babbitt
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பாட்ரிசியா பாபிட்
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type
label
Patricia Babbitt
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Patricia Babbitt
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Patricia Babbitt
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Patricia Babbitt
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Patricia Babbitt
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பாட்ரிசியா பாபிட்
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altLabel
Patricia C. Babbitt
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Patricia Clement Babbitt
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பாட்ரிசியா கிளமென்ட் பாபிட்
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prefLabel
Patricia Babbitt
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Patricia Babbitt
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Patricia Babbitt
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Patricia Babbitt
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Patricia Babbitt
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பாட்ரிசியா பாபிட்
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P101
P106
P166
P1960
DodD6ToAAAAJ
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P2456
P31
P496
0000-0003-0375-9015