Unravelling transmission trees of infectious diseases by combining genetic and epidemiological data
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Virus evolution and transmission in an ever more connected worldInferring the source of transmission with phylogenetic dataMolecular epidemiology, phylogeny and evolution of the filarial nematode Wuchereria bancroftiSampling through time and phylodynamic inference with coalescent and birth-death modelsOutbreakTools: a new platform for disease outbreak analysis using the R softwareA Systematic Bayesian Integration of Epidemiological and Genetic DataData-Driven Risk Assessment from Small Scale Epidemics: Estimation and Model Choice for Spatio-Temporal Data with Application to a Classical Swine Fever Outbreak.Key data for outbreak evaluation: building on the Ebola experience.A Bayesian inference framework to reconstruct transmission trees using epidemiological and genetic dataGenetic data provide evidence for wind-mediated transmission of highly pathogenic avian influenza.Bayesian reconstruction of disease outbreaks by combining epidemiologic and genomic data.Within-host bacterial diversity hinders accurate reconstruction of transmission networks from genomic distance data.Bayesian inference of infectious disease transmission from whole-genome sequence data.Epidemiologic data and pathogen genome sequences: a powerful synergy for public health.Four key challenges in infectious disease modelling using data from multiple sources.Reconstructing transmission trees for communicable diseases using densely sampled genetic dataUsing genomics data to reconstruct transmission trees during disease outbreaks.Emerging Concepts of Data Integration in Pathogen Phylodynamics.Design and methods of a social network isolation study for reducing respiratory infection transmission: The eX-FLU cluster randomized trial.Network epidemiology and plant trade networksSimultaneous inference of phylogenetic and transmission trees in infectious disease outbreaks.Phylogenetic tree shapes resolve disease transmission patterns.Estimating the per-contact probability of infection by highly pathogenic avian influenza (H7N7) virus during the 2003 epidemic in The Netherlands.Measurably evolving pathogens in the genomic eraTransmission of equine influenza virus during an outbreak is characterized by frequent mixed infections and loose transmission bottlenecks.The distribution of pairwise genetic distances: a tool for investigating disease transmission.Inference of R(0) and transmission heterogeneity from the size distribution of stuttering chainsModelling the transmission of healthcare associated infections: a systematic review.How the dynamics and structure of sexual contact networks shape pathogen phylogenies.A model for the early identification of sources of airborne pathogens in an outdoor environment.Generalized linear models for identifying predictors of the evolutionary diffusion of viruses.Combining phylogeography and spatial epidemiology to uncover predictors of H5N1 influenza A virus diffusion.'SEEDY' (Simulation of Evolutionary and Epidemiological Dynamics): An R Package to Follow Accumulation of Within-Host Mutation in Pathogens.Phylogenetic Exploration of Nosocomial Transmission Chains of 2009 Influenza A/H1N1 among Children Admitted at Red Cross War Memorial Children's Hospital, Cape Town, South Africa in 2011Epidemic Reconstruction in a Phylogenetics Framework: Transmission Trees as Partitions of the Node Set.Wild waterfowl migration and domestic duck density shape the epidemiology of highly pathogenic H5N8 influenza in the Republic of Korea.Revealing the Micro-scale Signature of Endemic Zoonotic Disease Transmission in an African Urban Setting.Molecular Infectious Disease Epidemiology: Survival Analysis and Algorithms Linking Phylogenies to Transmission TreesSCOTTI: Efficient Reconstruction of Transmission within Outbreaks with the Structured CoalescentGenotyping Oral Commensal Bacteria to Predict Social Contact and Structure.
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Unravelling transmission trees of infectious diseases by combining genetic and epidemiological data
description
article
@en
im Februar 2012 veröffentlichter wissenschaftlicher Artikel
@de
wetenschappelijk artikel
@nl
наукова стаття, опублікована в лютому 2012
@uk
name
Unravelling transmission trees ...... netic and epidemiological data
@en
Unravelling transmission trees ...... netic and epidemiological data
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type
label
Unravelling transmission trees ...... netic and epidemiological data
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Unravelling transmission trees ...... netic and epidemiological data
@nl
prefLabel
Unravelling transmission trees ...... netic and epidemiological data
@en
Unravelling transmission trees ...... netic and epidemiological data
@nl
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P2860
P356
P1476
Unravelling transmission trees ...... netic and epidemiological data
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A Stegeman
R J F Ypma
W M van Ballegooijen
P2860
P304
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10.1098/RSPB.2011.0913
P407
P577
2011-07-06T00:00:00Z