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Alliance of proteomics and genomics to unravel the specificities of Sahara bacterium Deinococcus desertiCrystal structure of the ligand-binding domain of the retinoid X receptor from the ascidian Polyandrocarpa misakiensisCrystal structure of the IrrE protein, a central regulator of DNA damage repair in deinococcaceaeSecretion of elastinolytic enzymes and their propeptides by Pseudomonas aeruginosa.Deinococcus deserti sp. nov., a gamma-radiation-tolerant bacterium isolated from the Sahara Desert.RNA sequencing and proteogenomics reveal the importance of leaderless mRNAs in the radiation-tolerant bacterium Deinococcus deserti.Comparative proteomics reveals key proteins recruited at the nucleoid of Deinococcus after irradiation-induced DNA damage.Conservation and diversity of the IrrE/DdrO-controlled radiation response in radiation-resistant Deinococcus bacteria.Major soluble proteome changes in Deinococcus deserti over the earliest stages following gamma-ray irradiationProteomics-based refinement of Deinococcus deserti genome annotation reveals an unwonted use of non-canonical translation initiation codons.Activation of the Pseudomonas aeruginosa type III secretion system requires an intact pyruvate dehydrogenase aceAB operon.The abundant and essential HU proteins in Deinococcus deserti and Deinococcus radiodurans are translated from leaderless mRNA.Radiation response in Deinococcus deserti: IrrE is a metalloprotease that cleaves repressor protein DdrO.Identification of a novel Gsp-related pathway required for secretion of the manganese-oxidizing factor of Pseudomonas putida strain GB-1.DHR51, the Drosophila melanogaster homologue of the human photoreceptor cell-specific nuclear receptor, is a thiolate heme-binding protein.A conserved retinoid X receptor (RXR) from the mollusk Biomphalaria glabrata transactivates transcription in the presence of retinoids.The effect of gamma-ray irradiation on the Mn(II) speciation in Deinococcus radiodurans and the potential role of Mn(II)-orthophosphates.Molecular organization of the xcp gene cluster in Pseudomonas putida: absence of an xcpX (gspK) homologue.Bacterial host and reporter gene optimization for genetically encoded whole cell biosensors.A comparative proteomic approach to better define Deinococcus nucleoid specificities.Overexpression and purification of Pyrococcus abyssi phosphopantetheine adenylyltransferase from an optimized synthetic gene for NMR studies.Conservation and diversity of radiation and oxidative stress resistance mechanisms in Deinococcus speciesConservation of xcp genes, involved in the two-step protein secretion process, in different Pseudomonas species and other gram-negative bacteriaGenes involved in the biosynthesis of PQQ from Acinetobacter calcoaceticusRole of the lipB gene product in the folding of the secreted lipase of Pseudomonas glumaeInteraction domains in the Pseudomonas aeruginosa type II secretory apparatus component XcpS (GspF)Crystal structure of the transcriptional repressor DdrO: insight into the metalloprotease/repressor-controlled radiation response in Deinococcus
P50
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P50
description
onderzoeker
@nl
researcher, ORCID id # 0000-0003-2202-5279
@en
name
Arjan de Groot
@ast
Arjan de Groot
@en
Arjan de Groot
@nl
type
label
Arjan de Groot
@ast
Arjan de Groot
@en
Arjan de Groot
@nl
prefLabel
Arjan de Groot
@ast
Arjan de Groot
@en
Arjan de Groot
@nl
P106
P31
P496
0000-0003-2202-5279