OpenDMAP: an open source, ontology-driven concept analysis engine, with applications to capturing knowledge regarding protein transport, protein interactions and cell-type-specific gene expression
about
Biomedical discovery acceleration, with applications to craniofacial developmentEvaluation of an Ontology-anchored Natural Language-based Approach for Asserting Multi-scale Biomolecular Networks for Systems MedicineGraph theory enables drug repurposing--how a mathematical model can drive the discovery of hidden mechanisms of actionThe role of ontologies in biological and biomedical research: a functional perspectiveKnowLife: a versatile approach for constructing a large knowledge graph for biomedical sciencesLarge-scale biomedical concept recognition: an evaluation of current automatic annotators and their parametersBioEve Search: A Novel Framework to Facilitate Interactive Literature SearchU-Compare bio-event meta-service: compatible BioNLP event extraction servicesIntegration and publication of heterogeneous text-mined relationships on the Semantic WebConstruction of phosphorylation interaction networks by text mining of full-length articles using the eFIP system.RLIMS-P 2.0: A Generalizable Rule-Based Information Extraction System for Literature Mining of Protein Phosphorylation InformationHIGH-PRECISION BIOLOGICAL EVENT EXTRACTION: EFFECTS OF SYSTEM AND OF DATA.A mutation-centric approach to identifying pharmacogenomic relations in text.Semantic role labeling for protein transport predicates.All-paths graph kernel for protein-protein interaction extraction with evaluation of cross-corpus learningA realistic assessment of methods for extracting gene/protein interactions from free text.Challenges for automatically extracting molecular interactions from full-text articles.Looking at cerebellar malformations through text-mined interactomes of mice and humansThematic series on biomedical ontologies in JBMS: challenges and new directions.A UIMA wrapper for the NCBO annotator.A comprehensive benchmark of kernel methods to extract protein-protein interactions from literatureBELMiner: adapting a rule-based relation extraction system to extract biological expression language statements from bio-medical literature evidence sentences.Ranking gene-drug relationships in biomedical literature using Latent Dirichlet AllocationRepresenting annotation compositionality and provenance for the Semantic Web.Exploring species-based strategies for gene normalization.Detection of interaction articles and experimental methods in biomedical literatureSimple tricks for improving pattern-based information extraction from the biomedical literature.Context-specific protein network miner--an online system for exploring context-specific protein interaction networks from the literature.Using text to build semantic networks for pharmacogenomics.Recent progress in automatically extracting information from the pharmacogenomic literature.A generalizable NLP framework for fast development of pattern-based biomedical relation extraction systems.Chapter 16: text mining for translational bioinformatics.PIMiner: a web tool for extraction of protein interactions from biomedical literature.Automatic extraction of nanoparticle properties using natural language processing: NanoSifter an application to acquire PAMAM dendrimer properties.SimConcept: a hybrid approach for simplifying composite named entities in biomedical textTeaching computers to read the pharmacogenomics literature ... so you don't have toWhat the papers say: text mining for genomics and systems biology.Preliminary evaluation of the CellFinder literature curation pipeline for gene expression in kidney cells and anatomical parts.Is the crowd better as an assistant or a replacement in ontology engineering? An exploration through the lens of the Gene OntologyConcept recognition for extracting protein interaction relations from biomedical text
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P2860
OpenDMAP: an open source, ontology-driven concept analysis engine, with applications to capturing knowledge regarding protein transport, protein interactions and cell-type-specific gene expression
description
2008 nî lūn-bûn
@nan
2008 թուականին հրատարակուած գիտական յօդուած
@hyw
2008 թվականին հրատարակված գիտական հոդված
@hy
2008年の論文
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2008年論文
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2008年論文
@zh-hant
2008年論文
@zh-hk
2008年論文
@zh-mo
2008年論文
@zh-tw
2008年论文
@wuu
name
OpenDMAP: an open source, onto ...... -type-specific gene expression
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OpenDMAP: an open source, onto ...... -type-specific gene expression
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OpenDMAP: an open source, onto ...... -type-specific gene expression
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OpenDMAP: an open source, onto ...... -type-specific gene expression
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OpenDMAP: an open source, onto ...... -type-specific gene expression
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OpenDMAP: an open source, onto ...... -type-specific gene expression
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OpenDMAP: an open source, onto ...... -type-specific gene expression
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OpenDMAP: an open source, onto ...... -type-specific gene expression
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OpenDMAP: an open source, onto ...... -type-specific gene expression
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Helen L Johnson
James Firby
Philip V Ogren
William A Baumgartner
Zhiyong Lu
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P356
10.1186/1471-2105-9-78
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2008-01-01T00:00:00Z
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1030172418