RNA secondary structure prediction by centroids in a Boltzmann weighted ensemble - Wikidata - thesis-toulmin - TriplyDB

RNA secondary structure prediction by centroids in a Boltzmann weighted ensemble

RNA secondary structure prediction by centroids in a Boltzmann weighted ensemble

http://www.wikidata.org/entity/Q24537445

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Complete probabilistic analysis of RNA shapes ViennaRNA Package 2.0 Human ribosomal protein S13 regulates expression of its own gene at the splicing step by a feedback mechanism MODENA: a multi-objective RNA inverse folding RNAstructure: software for RNA secondary structure prediction and analysis RNAG: a new Gibbs sampler for predicting RNA secondary structure for unaligned sequences Exact calculation of distributions on integers, with application to sequence alignment The Vienna RNA websuite A phylogenetic Gibbs sampler that yields centroid solutions for cis-regulatory site prediction Predictions of RNA secondary structure by combining homologous sequence information Next-generation SELEX identifies sequence and structural determinants of splicing factor binding in human pre-mRNA sequence FoxL2 and Smad3 coordinately regulate follistatin gene transcription New insights from cluster analysis methods for RNA secondary structure prediction Computational analysis of noncoding RNAs Efficient Algorithms for Probing the RNA Mutation Landscape A Hepatitis C Virus cis-Acting Replication Element Forms a Long-Range RNA-RNA Interaction with Upstream RNA Sequences in NS5B Development of RNA Aptamers Targeting Ebola Virus VP35 A Smad-binding element in intron 1 participates in activin-dependent regulation of the follistatin gene Translation inhibition of the developmental cycle protein HctA by the small RNA IhtA is conserved across Chlamydia A viral RNA structural element alters host recognition of nonself RNA Disease-associated mutations that alter the RNA structural ensemble UBXD4, a UBX-containing protein, regulates the cell surface number and stability of alpha3-containing nicotinic acetylcholine receptors Evolutionary evidence for alternative structure in RNA sequence co-variation Rich RNA Structure Landscapes Revealed by Mutate-and-Map Analysis MONSTER v1.1: a tool to extract and search for RNA non-branching structures Multiple conformations are a conserved and regulatory feature of the RB1 5' UTR A range of complex probabilistic models for RNA secondary structure prediction that includes the nearest-neighbor model and more Generalized centroid estimators in bioinformatics Polymorphisms in human heat shock factor-1 and analysis of potential biological consequences.A MYLK variant regulates asthmatic inflammation via alterations in mRNA secondary structure Correlation of RNA secondary structure statistics with thermodynamic stability and applications to folding.SeqFold: genome-scale reconstruction of RNA secondary structure integrating high-throughput sequencing data.Improved prediction of RNA secondary structure by integrating the free energy model with restraints derived from experimental probing data A structural analysis of in vitro catalytic activities of hammerhead ribozymes.A structural interpretation of the effect of GC-content on efficiency of RNA interference.Improving consensus structure by eliminating averaging artifacts.Evaluation of the information content of RNA structure mapping data for secondary structure prediction.Detection of tmRNA molecules on microarrays at low temperatures using helper oligonucleotides Systematic design and functional analysis of artificial microRNAs.Optimization of a novel biophysical model using large scale in vivo antisense hybridization data displays improved prediction capabilities of structurally accessible RNA regions

P2860

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P2860

RNA secondary structure prediction by centroids in a Boltzmann weighted ensemble

http://www.wikidata.org/entity/Q24537445

description

2005 nî lūn-bûn

@nan

2005 թուականի Օգոստոսին հրատարակուած գիտական յօդուած

@hyw

2005 թվականի օգոստոսին հրատարակված գիտական հոդված

@hy

2005年の論文

@ja

2005年論文

@yue

2005年論文

@zh-hant

2005年論文

@zh-hk

2005年論文

@zh-mo

2005年論文

@zh-tw

2005年论文

@wuu

name

RNA secondary structure prediction by centroids in a Boltzmann weighted ensemble

@ast

RNA secondary structure prediction by centroids in a Boltzmann weighted ensemble

@en

RNA secondary structure prediction by centroids in a Boltzmann weighted ensemble

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type

label

RNA secondary structure prediction by centroids in a Boltzmann weighted ensemble

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RNA secondary structure prediction by centroids in a Boltzmann weighted ensemble

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RNA secondary structure prediction by centroids in a Boltzmann weighted ensemble

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prefLabel

RNA secondary structure prediction by centroids in a Boltzmann weighted ensemble

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RNA secondary structure prediction by centroids in a Boltzmann weighted ensemble

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RNA secondary structure prediction by centroids in a Boltzmann weighted ensemble

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RNA secondary structure prediction by centroids in a Boltzmann weighted ensemble

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Charles E Lawrence

http://www.w3.org/2001/XMLSchema#string

Chi Yu Chan

http://www.w3.org/2001/XMLSchema#string

Ye Ding

http://www.w3.org/2001/XMLSchema#string

P2860

Evaluation of several lightweight stochastic context-free grammars for RNA secondary structure prediction

Mfold web server for nucleic acid folding and hybridization prediction

Using an RNA secondary structure partition function to determine confidence in base pairs predicted by free energy minimization

The Ribonuclease P Database

Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structure

Abstract shapes of RNA

New RNA motifs suggest an expanded scope for riboswitches in bacterial genetic control

Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information

A statistical sampling algorithm for RNA secondary structure prediction

SRP-RNA sequence alignment and secondary structure

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1157-66

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scholarly article

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2707557

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10.1261/RNA.2500605

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8

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11

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16043502

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