Genome-wide in silico identification and analysis of cis natural antisense transcripts (cis-NATs) in ten species - Wikidata - thesis-toulmin - TriplyDB

Genome-wide in silico identification and analysis of cis natural antisense transcripts (cis-NATs) in ten species

Genome-wide in silico identification and analysis of cis natural antisense transcripts (cis-NATs) in ten species

http://www.wikidata.org/entity/Q24685558

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In C. elegans, high levels of dsRNA allow RNAi in the absence of RDE-4 Evidence for a major role of antisense RNAs in cyanobacterial gene regulation Cis-Natural Antisense Transcripts Are Mainly Co-expressed with Their Sense Transcripts and Primarily Related to Energy Metabolic Pathways during Muscle Development.RNA editome in rhesus macaque shaped by purifying selection Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2 Potential pitfalls in the accuracy of analysis of natural sense-antisense RNA pairs by reverse transcription-PCR Small RNAs and the regulation of cis-natural antisense transcripts in Arabidopsis.Transcriptional regulation of translocator protein (Tspo) via a SINE B2-mediated natural antisense transcript in MA-10 Leydig cells.Sense-antisense pairs in mammals: functional and evolutionary considerations.Antisense transcription in the human cytomegalovirus transcriptome.antiCODE: a natural sense-antisense transcripts database.Birth and death of gene overlaps in vertebrates.Non-random retention of protein-coding overlapping genes in Metazoa.Bioinformatics in China: a personal perspective Generation of a non-small cell lung cancer transcriptome microarray Sense and antisense OsDof12 transcripts in rice.Identification of novel endogenous antisense transcripts by DNA microarray analysis targeting complementary strand of annotated genes.A noncoding antisense RNA in tie-1 locus regulates tie-1 function in vivo.Functional and evolutionary correlates of gene constellations in the Drosophila melanogaster genome that deviate from the stereotypical gene architecture Development of an oligo DNA microarray for the European sea bass and its application to expression profiling of jaw deformity Genome-wide characterization of the biggest grass, bamboo, based on 10,608 putative full-length cDNA sequences.Chromatin-remodeling factors mediate the balance of sense-antisense transcription at the FGF2 locus Global analysis of cis-natural antisense transcripts and their heat-responsive nat-siRNAs in Brassica rapa.Natural antisense transcripts are significantly involved in regulation of drought stress in maize.Regulatory roles of natural antisense transcripts.Dicer's helicase domain is required for accumulation of some, but not all, C. elegans endogenous siRNAs.Proper regulation of a sperm-specific cis-nat-siRNA is essential for double fertilization in Arabidopsis.Transcriptome sequencing and microarray development for the Manila clam, Ruditapes philippinarum: genomic tools for environmental monitoring.Hormone-dependent expression of a steroidogenic acute regulatory protein natural antisense transcript in MA-10 mouse tumor Leydig cells The subtelomere of Oryza sativa chromosome 3 short arm as a hot bed of new gene origination in rice.SNPs detection in DHPS-WDR83 overlapping genes mapping on porcine chromosome 2 in a QTL region for meat pH.Experimental annotation of the human pathogen Candida albicans coding and noncoding transcribed regions using high-resolution tiling arrays Bidirectional regulation between WDR83 and its natural antisense transcript DHPS in gastric cancer.RhesusBase: a knowledgebase for the monkey research community Strand-specific RNA-seq reveals widespread occurrence of novel cis-natural antisense transcripts in rice.A genome-wide investigation of expression characteristics of natural antisense transcripts in liver and muscle samples of pigs.The role of antisense long noncoding RNA in small RNA-triggered gene activation.Whole-transcriptome, high-throughput RNA sequence analysis of the bovine macrophage response to Mycobacterium bovis infection in vitro.Conserved expression of natural antisense transcripts in mammals.RNA-Seq analysis of splicing in Plasmodium falciparum uncovers new splice junctions, alternative splicing and splicing of antisense transcripts

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Genome-wide in silico identification and analysis of cis natural antisense transcripts (cis-NATs) in ten species

http://www.wikidata.org/entity/Q24685558

description

2006 nî lūn-bûn

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2006 թուականին հրատարակուած գիտական յօդուած

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2006年の論文

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Genome-wide in silico identifi ...... ipts (cis-NATs) in ten species

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Genome-wide in silico identifi ...... ipts (cis-NATs) in ten species

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Genome-wide in silico identifi ...... ipts (cis-NATs) in ten species

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type

label

Genome-wide in silico identifi ...... ipts (cis-NATs) in ten species

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Genome-wide in silico identifi ...... ipts (cis-NATs) in ten species

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Genome-wide in silico identifi ...... ipts (cis-NATs) in ten species

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prefLabel

Genome-wide in silico identifi ...... ipts (cis-NATs) in ten species

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Genome-wide in silico identifi ...... ipts (cis-NATs) in ten species

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Genome-wide in silico identifi ...... ipts (cis-NATs) in ten species

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Nucleic Acids Research

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Genome-wide in silico identifi ...... ipts (cis-NATs) in ten species

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Liping Wei

http://www.w3.org/2001/XMLSchema#string

X Shirley Liu

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Yong Zhang

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P2860

Annotation of the Drosophila melanogaster euchromatic genome: a systematic review

Genome-wide prediction and identification of cis-natural antisense transcripts in Arabidopsis thaliana.

Gene ontology: tool for the unification of biology

Phylogenetic conservation of the makorin-2 gene, encoding a multiple zinc-finger protein, antisense to the RAF1 proto-oncogene

Natural antisense transcripts associated with genes involved in eye development

KEGG: kyoto encyclopedia of genes and genomes

In silico discovery of human natural antisense transcripts.

Over 20% of human transcripts might form sense-antisense pairs

Patterns of variant polyadenylation signal usage in human genes

Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis

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3465-75

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10.1093/NAR/GKL473

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12

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34

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6937266

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16849434

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1524920

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