Two new rapid SNP-typing methods for classifying Mycobacterium tuberculosis complex into the main phylogenetic lineages
about
Consequences of genomic diversity in Mycobacterium tuberculosisSingle nucleotide polymorphisms in Mycobacterium tuberculosis and the need for a curated databaseRapid antibiotic-resistance predictions from genome sequence data for Staphylococcus aureus and Mycobacterium tuberculosisMethodological and Clinical Aspects of the Molecular Epidemiology of Mycobacterium tuberculosis and Other MycobacteriaFirst insights into the phylogenetic diversity of Mycobacterium tuberculosis in NepalxMAP Technology: Applications in Detection of PathogensOptimizing multiplex SNP-based data analysis for genotyping of Mycobacterium tuberculosis isolatesAccurate and effective multidrug-resistant Mycobacterium tuberculosis detection method using gap-filling ligation coupled with high-resolution capillary electrophoresis-based single strand conformation polymorphism.Unexpected high prevalence of resistance-associated Rv0678 variants in MDR-TB patients without documented prior use of clofazimine or bedaquilineLineage-specific SNPs for genotyping of Mycobacterium tuberculosis clinical isolates.A robust SNP barcode for typing Mycobacterium tuberculosis complex strains.KvarQ: targeted and direct variant calling from fastq reads of bacterial genomes.Genetic diversity and transmission characteristics of Beijing family strains of Mycobacterium tuberculosis in PeruHIV infection disrupts the sympatric host-pathogen relationship in human tuberculosisDiversity of Mycobacterium tuberculosis and drug resistance in different provinces of Papua New GuineaMycobacterium africanum is associated with patient ethnicity in GhanaGuidelines for optimisation of a multiplex oligonucleotide ligation-PCR for characterisation of microbial pathogens in a microsphere suspension array.Comparing Mycobacterium tuberculosis genomes using genome topology networks.Evaluation of customised lineage-specific sets of MIRU-VNTR loci for genotyping Mycobacterium tuberculosis complex isolates in GhanaClinical application of whole-genome sequencing to inform treatment for multidrug-resistant tuberculosis cases.Rapid determination of anti-tuberculosis drug resistance from whole-genome sequencesTracking a tuberculosis outbreak over 21 years: strain-specific single-nucleotide polymorphism typing combined with targeted whole-genome sequencingGenetic diversity and molecular epidemiology of multidrug-resistant Mycobacterium tuberculosis in Minas Gerais State, Brazil.A single-nucleotide-polymorphism real-time PCR assay for genotyping of Mycobacterium tuberculosis complex in peri-urban Kampala.First insights into circulating Mycobacterium tuberculosis complex lineages and drug resistance in Guinea.A multiplex oligonucleotide ligation-PCR as a complementary tool for subtyping of Salmonella TyphimuriumMolecular epidemiology of Mycobacterium africanum in GhanaNovel Single Nucleotide Polymorphism-Based Assay for Genotyping Mycobacterium avium subsp. paratuberculosisRegion of difference 4 in alpine Mycobacterium caprae isolates indicates three variants.Draft Genome Sequence of a Mycobacterium africanum Clinical Isolate from Antioquia, Colombia.Whole-genome sequencing to establish relapse or re-infection with Mycobacterium tuberculosis: a retrospective observational study.Urgent Implementation in a Hospital Setting of a Strategy To Rule Out Secondary Cases Caused by Imported Extensively Drug-Resistant Mycobacterium tuberculosis Strains at Diagnosis.Sequence diversity in the pe_pgrs genes of Mycobacterium tuberculosis is independent of human T cell recognitionMycobacterium tuberculosis lineage 4 comprises globally distributed and geographically restricted sublineages.Ultrafast Assessment of the Presence of a High-Risk Mycobacterium tuberculosis Strain in a PopulationMolecular Subtyping of Salmonella Typhimurium with Multiplex Oligonucleotide Ligation-PCR (MOL-PCR).Mycobacterium tuberculosis resistance prediction and lineage classification from genome sequencing: comparison of automated analysis tools.Optimized MOL-PCR for Characterization of Microbial Pathogens.Simple multiplex PCR assay for identification of Beijing family Mycobacterium tuberculosis isolates with a lineage-specific mutation in Rv0679c.Whole-genome sequencing of the Mycobacterium tuberculosis Manila sublineage results in less clustering and better resolution than mycobacterial interspersed repetitive-unit-variable-number tandem-repeat (MIRU-VNTR) typing and spoligotyping.
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P2860
Two new rapid SNP-typing methods for classifying Mycobacterium tuberculosis complex into the main phylogenetic lineages
description
2012 nî lūn-bûn
@nan
2012 թուականին հրատարակուած գիտական յօդուած
@hyw
2012 թվականին հրատարակված գիտական հոդված
@hy
2012年の論文
@ja
2012年論文
@yue
2012年論文
@zh-hant
2012年論文
@zh-hk
2012年論文
@zh-mo
2012年論文
@zh-tw
2012年论文
@wuu
name
Two new rapid SNP-typing metho ...... the main phylogenetic lineages
@ast
Two new rapid SNP-typing metho ...... the main phylogenetic lineages
@en
Two new rapid SNP-typing metho ...... the main phylogenetic lineages
@nl
type
label
Two new rapid SNP-typing metho ...... the main phylogenetic lineages
@ast
Two new rapid SNP-typing metho ...... the main phylogenetic lineages
@en
Two new rapid SNP-typing metho ...... the main phylogenetic lineages
@nl
prefLabel
Two new rapid SNP-typing metho ...... the main phylogenetic lineages
@ast
Two new rapid SNP-typing metho ...... the main phylogenetic lineages
@en
Two new rapid SNP-typing metho ...... the main phylogenetic lineages
@nl
P2093
P2860
P50
P3181
P1433
P1476
Two new rapid SNP-typing metho ...... the main phylogenetic lineages
@en
P2093
Bijaya Malla
Julia Feldmann
Mireia Coscollà
Sebastien Gagneux
Simon Hostettler
Sonia Borrell
Thembela Huna
P2860
P304
P3181
P356
10.1371/JOURNAL.PONE.0041253
P407
P577
2012-01-01T00:00:00Z