Topological analysis and interactive visualization of biological networks and protein structures. - Wikidata - thesis-toulmin - TriplyDB

Topological analysis and interactive visualization of biological networks and protein structures.

Topological analysis and interactive visualization of biological networks and protein structures.

http://www.wikidata.org/entity/Q30414346

about

Biophysical and computational methods to analyze amino acid interaction networks in proteins Structure and dynamics of molecular networks: a novel paradigm of drug discovery: a comprehensive review Structural insights into N-terminal to C-terminal interactions and implications for thermostability of a (β/α)8-triosephosphate isomerase barrel enzyme The role of protein dynamics in the evolution of new enzyme function Systems Biology for Smart Crops and Agricultural Innovation: Filling the Gaps between Genotype and Phenotype for Complex Traits Linked with Robust Agricultural Productivity and Sustainability An Integrative Analysis of Preeclampsia Based on the Construction of an Extended Composite Network Featuring Protein-Protein Physical Interactions and Transcriptional Relationships From Proteomic Analysis to Potential Therapeutic Targets: Functional Profile of Two Lung Cancer Cell Lines, A549 and SW900, Widely Studied in Pre-Clinical Research The last enzyme of the de novo purine synthesis pathway 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase (ATIC) plays a central role in insulin signaling and the Golgi/endosomes protein network Graphlet signature-based scoring method to estimate protein-ligand binding affinity xiNET: cross-link network maps with residue resolution Biological network exploration with Cytoscape 3 Changes in the Structure of the Microbial Community Associated with Nannochloropsis salina following Treatments with Antibiotics and Bioactive Compounds The RING 2.0 web server for high quality residue interaction networks The construction of an amino acid network for understanding protein structure and function.Integrative visual analysis of protein sequence mutations.Allosteric pathway identification through network analysis: from molecular dynamics simulations to interactive 2D and 3D graphs.Characteristics Analyses and Comparisons of the Protein Structure Networks Constructed by Different Methods.Predicting Designability of Small Proteins from Graph Features of Contact Maps Resolving protein structure-function-binding site relationships from a binding site similarity network perspective.The effect of edge definition of complex networks on protein structure identification.Network analysis of time-lapse microscopy recordings.Systems analysis of transcriptome data provides new hypotheses about Arabidopsis root response to nitrate treatments.Integrated microRNA and messenger RNA analysis in aortic stenosis.16S rRNA gene high-throughput sequencing data mining of microbial diversity and interactions.Systems biology analysis merging phenotype, metabolomic and genomic data identifies Non-SMC Condensin I Complex, Subunit G (NCAPG) and cellular maintenance processes as major contributors to genetic variability in bovine feed efficiency.Tools for visualization and analysis of molecular networks, pathways, and -omics data.Construction of citrus gene coexpression networks from microarray data using random matrix theory.The Arabidopsis phytohormone crosstalk network involves a consecutive metabolic route and circular control units of transcription factors that regulate enzyme-encoding genes.Cancer Transcriptome Dataset Analysis: Comparing Methods of Pathway and Gene Regulatory Network-Based Cluster Identification.Delayed response to cold stress is characterized by successive metabolic shifts culminating in apple fruit peel necrosis.Selecting biologically informative genes in co-expression networks with a centrality score.NAP: The Network Analysis Profiler, a web tool for easier topological analysis and comparison of medium-scale biological networks Understanding protein-nanoparticle interaction: a new gateway to disease therapeutics.Transcriptional evidence for inferred pattern of pollen tube-stigma metabolic coupling during pollination Large differences in global transcriptional regulatory programs of normal and tumor colon cells Altered gene transcription in human cells treated with Ludox® silica nanoparticles.Integrating protein-protein interaction networks with phenotypes reveals signs of interactions.Transcriptome analysis reveals genes commonly induced by Botrytis cinerea infection, cold, drought and oxidative stresses in Arabidopsis.Bridging HIV-1 cellular latency and clinical long-term non-progressor: an interactomic view EINVis: a visualization tool for analyzing and exploring genetic interactions in large-scale association studies.

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Topological analysis and interactive visualization of biological networks and protein structures.

http://www.wikidata.org/entity/Q30414346

description

2012 nî lūn-bûn

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2012 թուականի Մարտին հրատարակուած գիտական յօդուած

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2012 թվականի մարտին հրատարակված գիտական հոդված

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2012年の論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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2012年论文

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Topological analysis and inter ...... tworks and protein structures.

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Topological analysis and inter ...... tworks and protein structures.

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Topological analysis and inter ...... tworks and protein structures.

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Topological analysis and inter ...... tworks and protein structures.

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Topological analysis and inter ...... tworks and protein structures.

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Topological analysis and inter ...... tworks and protein structures.

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Nature Protocols

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Topological analysis and inter ...... tworks and protein structures.

@en

P2093

Mario Albrecht

http://www.w3.org/2001/XMLSchema#string

Yassen Assenov

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P2860

An automated method for finding molecular complexes in large protein interaction networks

Scale-free networks in cell biology

Next-generation sequencing to generate interactome datasets

A human protein-protein interaction network: a resource for annotating the proteome

The Protein Data Bank

Cytoscape: a software environment for integrated models of biomolecular interaction networks

VisANT: data-integrating visual framework for biological networks and modules.

Emergence of Scaling in Random Networks

Molecular basis of telaprevir resistance due to V36 and T54 mutations in the NS3-4A protease of the hepatitis C virus

Crystal structure of a complex of HIV-1 protease with a dihydroxyethylene-containing inhibitor: Comparisons with molecular modeling

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670-685

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scholarly article

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10.1038/NPROT.2012.004

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4

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7

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Nadezhda Tsankova Doncheva

Francisco S Domingues

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2012-03-15T00:00:00Z

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1015407882

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22422314

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