DNA metabarcoding multiplexing and validation of data accuracy for diet assessment: application to omnivorous diet. - Wikidata - thesis-toulmin - TriplyDB

DNA metabarcoding multiplexing and validation of data accuracy for diet assessment: application to omnivorous diet.

DNA metabarcoding multiplexing and validation of data accuracy for diet assessment: application to omnivorous diet.

http://www.wikidata.org/entity/Q30678001

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Advances in DNA metabarcoding for food and wildlife forensic species identification Conservation Biological Control of Pests in the Molecular Era: New Opportunities to Address Old Constraints DNA barcoding identifies a cosmopolitan diet in the ocean sunfish.Detection of Invasive Mosquito Vectors Using Environmental DNA (eDNA) from Water Samples DNA metabarcoding illuminates dietary niche partitioning by African large herbivores.Environmental DNA from Seawater Samples Correlate with Trawl Catches of Subarctic, Deepwater Fishes Replication levels, false presences and the estimation of the presence/absence from eDNA metabarcoding data.Replacing Sanger with Next Generation Sequencing to improve coverage and quality of reference DNA barcodes for plants Biomonitoring of marine vertebrates in Monterey Bay using eDNA metabarcoding.Reconstructing a herbivore's diet using a novel rbcL DNA mini-barcode for plants.Non-invasive genetics outperforms morphological methods in faecal dietary analysis, revealing wild boar as a considerable conservation concern for ground-nesting birds.DNA metabarcoding and the cytochrome c oxidase subunit I marker: not a perfect match.Ciliates and the rare biosphere: a review.Environmental monitoring. Harnessing DNA to improve environmental management.From benchtop to desktop: important considerations when designing amplicon sequencing workflows Next generation sequencing for characterizing biodiversity: promises and challenges.Tree diversity and species identity effects on soil fungi, protists and animals are context dependent.Next-generation monitoring of aquatic biodiversity using environmental DNA metabarcoding.Discovering hidden biodiversity: the use of complementary monitoring of fish diet based on DNA barcoding in freshwater ecosystems.Indexed PCR Primers Induce Template-Specific Bias in Large-Scale DNA Sequencing Studies Fecal metagenomics for the simultaneous assessment of diet, parasites, and population genetics of an understudied primate DAMe: a toolkit for the initial processing of datasets with PCR replicates of double-tagged amplicons for DNA metabarcoding analyses.Spatial Representativeness of Environmental DNA Metabarcoding Signal for Fish Biodiversity Assessment in a Natural Freshwater System.Selection of a marker gene to construct a reference library for wetland plants, and the application of metabarcoding to analyze the diet of wintering herbivorous waterbirds A quantitative protocol for DNA metabarcoding of springtails (Collembola).Uncovering Trophic Interactions in Arthropod Predators through DNA Shotgun-Sequencing of Gut Contents.Metabarcoding of Fecal Samples to Determine Herbivore Diets: A Case Study of the Endangered Pacific Pocket Mouse.Microbial Communities of Lycaenid Butterflies Do Not Correlate with Larval Diet.Effect of marker choice and thermal cycling protocol on zooplankton DNA metabarcoding studies Molecular dietary analysis of two sympatric felids in the Mountains of Southwest China biodiversity hotspot and conservation implications.Ancient plant DNA in lake sediments.Assessing vertebrate biodiversity in a kelp forest ecosystem using environmental DNA.DNA metabarcoding diet analysis for species with parapatric vs sympatric distribution: a case study on subterranean rodents.Using environmental DNA to census marine fishes in a large mesocosm.A from-benchtop-to-desktop workflow for validating HTS data and for taxonomic identification in diet metabarcoding studies.A comparison of sedimentary DNA and pollen from lake sediments in recording vegetation composition at the Siberian treeline.A framework for inferring biological communities from environmental DNA.Targeted gene enrichment and high-throughput sequencing for environmental biomonitoring: a case study using freshwater macroinvertebrates.DNA in a bottle-Rapid metabarcoding survey for early alerts of invasive species in ports.Molecular detection of invertebrate prey in vertebrate diets: trophic ecology of Caribbean island lizards.

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DNA metabarcoding multiplexing and validation of data accuracy for diet assessment: application to omnivorous diet.

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2013年の論文

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DNA metabarcoding multiplexing ...... pplication to omnivorous diet.

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DNA metabarcoding multiplexing ...... pplication to omnivorous diet.

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DNA metabarcoding multiplexing ...... pplication to omnivorous diet.

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Molecular Ecology Resources

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DNA metabarcoding multiplexing ...... pplication to omnivorous diet.

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P2860

Prey preference of snow leopard (Panthera uncia) in South Gobi, Mongolia

Removing noise from pyrosequenced amplicons

PCR fidelity of pfu DNA polymerase and other thermostable DNA polymerases

Killer whale predation on sea otters linking oceanic and nearshore ecosystems

Power and limitations of the chloroplast trnL (UAA) intron for plant DNA barcoding

Trophic cascades revealed in diverse ecosystems

Next-generation DNA sequencing

Universal primers for amplification of three non-coding regions of chloroplast DNA

Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates

DNA-based faecal dietary analysis: a comparison of qPCR and high throughput sequencing approaches.

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