ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data. - Wikidata - thesis-toulmin - TriplyDB

ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data.

ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data.

http://www.wikidata.org/entity/Q31049606

about

Structure, Evolution, and Functions of Bacterial Type III Toxin-Antitoxin Systems Lifemap: Exploring the Entire Tree of Life Genome-wide gene expression and RNA half-life measurements allow predictions of regulation and metabolic behavior in Methanosarcina acetivorans Genome of the pitcher plant Cephalotus reveals genetic changes associated with carnivory MimiLook: A Phylogenetic Workflow for Detection of Gene Acquisition in Major Orthologous Groups of Megavirales Dissemination of antibiotic resistance genes from antibiotic producers to pathogens.Evolutionary Conservation and Emerging Functional Diversity of the Cytosolic Hsp70:J Protein Chaperone Network of Arabidopsis thaliana Microfluidic-based mini-metagenomics enables discovery of novel microbial lineages from complex environmental samples.Comparative Genomic Analysis of Drechmeria coniospora Reveals Core and Specific Genetic Requirements for Fungal Endoparasitism of Nematodes Expanding the view on the evolution of the nematode dauer signalling pathways: refinement through gene gain and pathway co-option Multiple Independent Retroelement Insertions in the Promoter of a Stress Response Gene Have Variable Molecular and Functional Effects in Drosophila.The Tp0684 (MglB-2) Lipoprotein of Treponema pallidum: A Glucose-Binding Protein with Divergent Topology.Phylogeographic differentiation versus transcriptomic adaptation to warm temperatures in Zostera marina, a globally important seagrass.Complex Admixture Preceded and Followed the Extinction of Wisent in the Wild Increased rates of protein evolution and asymmetric deceleration after the whole-genome duplication in yeasts.BuddySuite: Command-Line Toolkits for Manipulating Sequences, Alignments, and Phylogenetic Trees.phylo-node: A molecular phylogenetic toolkit using Node.js.Mosquito Microbiome Dynamics, a Background for Prevalence and Seasonality of West Nile Virus.Unconventional Recombination in the Mating Type Locus of Heterothallic Apple Canker Pathogen Valsa mali.Global analysis of biosynthetic gene clusters reveals vast potential of secondary metabolite production in Penicillium species.A Critical Review on the Use of Support Values in Tree Viewers and Bioinformatics Toolkits.Multi-tissue RNA-seq and transcriptome characterisation of the spiny dogfish shark (Squalus acanthias) provides a molecular tool for biological research and reveals new genes involved in osmoregulation Fast genome-wide functional annotation through orthology assignment by eggNOG-mapper.Uniclust databases of clustered and deeply annotated protein sequences and alignments.Numerous uncharacterized and highly divergent microbes which colonize humans are revealed by circulating cell-free DNA.PathoBacTyper: A Web Server for Pathogenic Bacteria Identification and Molecular Genotyping Environmental drivers of a microbial genomic transition zone in the ocean's interior.Uncovering missing pieces: duplication and deletion history of arrestins in deuterostomes.Avoiding Regions Symptomatic of Conformational and Functional Flexibility to Identify Antiviral Targets in Current and Future Coronaviruses.Exploring Evolutionary Relationships Across the Genome Using Topology Weighting.Phyx: phylogenetic tools for unix.Improved orthology inference with Hieranoid 2.Identification and Network-Enabled Characterization of Auxin Response Factor Genes in Medicago truncatula.Computational discovery and functional validation of novel fluoroquinolone resistance genes in public metagenomic data sets.Computational Methods for Predicting Effectors in Rust Pathogens.Structure of Psb29/Thf1 and its association with the FtsH protease complex involved in photosystem II repair in cyanobacteria.A flagellum-specific chaperone facilitates assembly of the core type III export apparatus of the bacterial flagellum.The Distribution of Miniature Impala Elements and SIX Genes in the Fusarium Genus is Suggestive of Horizontal Gene Transfer.Cooperation between Strain-Specific and Broadly Neutralizing Responses Limited Viral Escape and Prolonged the Exposure of the Broadly Neutralizing Epitope.Seasonal Dynamics of Haptophytes and dsDNA Algal Viruses Suggest Complex Virus-Host Relationship.

P2860

Q28079157-8E82A94B-0DAF-4D16-9E6C-E5CC59B08148 Q28585171-28E495A6-EC10-46B6-8D10-3506B17D8B56 Q28595650-E52F0A8F-EA20-4DFC-8B15-BFD78994D38D Q28709882-1012218F-7B85-4D78-A22C-5B5FC575E87C Q33613516-510C988C-4857-4507-868E-F641250AAF75 Q33786634-595EA608-D322-4E0B-98D3-B5B33A4EB3A9 Q33807686-E94D74DA-BE58-47BF-BCCA-20E62A82F762 Q33874521-4B6B0237-7FAC-47FF-A4A8-7431AD20041E Q36011014-A6821A7B-62EC-4EF1-8F83-C94F70027282 Q36062844-D3E9E5A2-73FF-4E55-AEC9-88838BEA584D Q36102676-38A6324A-9381-4C6A-B1F4-AC4AD43BD2F3 Q36106671-7C780E1B-0F60-44A2-B0AD-07598329D52F Q36124012-5A20607D-BAEA-4CAE-8C60-1058EEC48C86 Q36231998-D78B5D52-CF48-4CC6-915C-1163215372AC Q36271937-69A35147-430F-45C3-90B3-61E673AACBE6 Q36319404-A7CB010B-EECA-46E7-A770-24FA89C83911 Q36347226-F78E664D-42C8-42E7-82D4-C289A2C0148D Q37736126-B7A29C39-18F4-4631-BD6D-5904CEC4FA30 Q37746487-966DC107-6BBD-4959-937C-7A66FEB2D4D9 Q38371710-CF0D7112-4BA6-41FD-BEB7-4E5ECCB623D4 Q38378636-4BE77E89-6AC7-473B-ACF9-3D416BC8D6CF Q38429509-F441B481-A47C-43A9-9A18-BFA8FFD5E698 Q38434106-44973228-5299-4706-A6F3-758AD21E92F6 Q38439750-2CB35C9B-9BF7-412E-B5E8-6B2BD6591F5B Q38613374-20D81BFB-E142-4677-854B-3408A33F46D5 Q38616709-958E1D82-484B-48BD-A121-2C472C8ADE56 Q38624954-BBA37458-3EDE-41B5-AF39-20041C298415 Q38690634-1B486379-9DFE-4D77-AE67-40855EF03411 Q38802017-3328AC91-CC8D-4192-8B1D-2C5AB9083B3E Q38877432-7D4ADBB6-493C-46C2-975E-BFD92188AD67 Q38973161-2D475E25-06E9-4796-9779-D942C41172AD Q39016286-7AEE467D-7721-4ABF-8724-F2224B06E276 Q39064979-C3EF4E53-303C-49A1-8846-52AC33C52C11 Q40069740-535D3D5C-7901-4AFF-853A-A78A0FBA101A Q40073359-96F1DE15-B924-41DE-B437-0EB38CCB9287 Q40093415-F502C4A2-84CD-462F-8FB2-E81A314B8C7E Q40108388-46F05C08-CE98-4460-8FA7-6AB6EA84A1F6 Q40119469-5C5D23BE-6206-4FC2-A7D2-2833DF80D201 Q40134111-E0CF1E0B-1DD8-46A0-AEA1-A76E58B4AD69 Q40234940-EFC83168-3123-44E9-AAC5-D015BB736784

P2860

ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data.

http://www.wikidata.org/entity/Q31049606

description

2016 nî lūn-bûn

@nan

2016 թուականի Փետրուարին հրատարակուած գիտական յօդուած

@hyw

2016 թվականի փետրվարին հրատարակված գիտական հոդված

@hy

2016年の論文

@ja

2016年論文

@yue

2016年論文

@zh-hant

2016年論文

@zh-hk

2016年論文

@zh-mo

2016年論文

@zh-tw

2016年论文

@wuu

name

ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data.

@ast

ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data.

@en

type

label

ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data.

@ast

ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data.

@en

prefLabel

ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data.

@ast

ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data.

@en

P1433

Q31049606-8098E1DE-D3A1-41DD-A8E3-1F16E20A9CF4

P1476

Q31049606-25982662-808D-4A45-9152-6D7C1DF9D3EA

P2093

Q31049606-017325A3-B360-4058-814B-2355015C07B4

P2860

Q31049606-15771D83-4F5D-49B9-B9BC-6FE4A5651C25

Q31049606-176BD817-A4C6-43B0-8252-504C588CA8D8

Q31049606-1A90DD50-107F-4244-B54B-E3245D1713CD

Q31049606-2970B406-51E3-4314-9927-9D2AAA0DC987

Q31049606-3534655C-4DA8-4787-A967-DDC9E809B2BD

Q31049606-3EF319FB-52C0-4EF7-A631-DC0B08989839

Q31049606-46BC36AA-7441-4124-8EC7-11699CCD0EC2

Q31049606-482C30AC-DF67-4989-A0DD-1513004F0647

Q31049606-5AD425E0-3AB8-4C41-81A7-D6DDBAB34864

Q31049606-5B0F3559-A929-454E-A513-8FB9C7F5C7C1

P304

Q31049606-6722A268-09EC-4E57-9599-53475878D88D

P31

Q31049606-BB8C2B45-AB16-4049-906E-A5B68050A4A9

P356

Q31049606-0C3394E9-93A3-4425-BF28-CCC620A7BCF2

P433

Q31049606-D11FF036-3C4A-4F86-9141-FB641CE263A2

P478

Q31049606-98A6DE24-F977-4AE4-BE92-972B7905998D

P50

Q31049606-23C4C730-AE88-4CF6-B61B-FC75FFE010E2

Q31049606-39B456FD-B87F-4734-85BF-3D85CB6BF282

P577

Q31049606-3B5F4288-85D3-4360-82FA-02EE70E852EB

P5875

Q31049606-A8ACF7C6-1061-40DD-B9AD-2D2181F1134A

P698

Q31049606-6E4D1017-3538-4088-B883-99AD6C0871D8

P921

Q31049606-4CDC45C2-CE13-4BE6-9371-412D943D5908

Q31049606-CA360D0A-1D33-495D-AF93-7A193843B555

P932

Q31049606-FA645210-5087-4F47-8365-CE92115D0554

P356

P1433

Molecular Biology and Evolution

P1476

ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data

@en

P2093

Jaime Huerta-Cepas

http://www.w3.org/2001/XMLSchema#string

P2860

Genome sequence of the pea aphid Acyrthosiphon pisum

ETE: a python Environment for Tree Exploration

PyCogent: a toolkit for making sense from sequence.

Whole-genome analyses resolve early branches in the tree of life of modern birds

The Spirodela polyrhiza genome reveals insights into its neotenous reduction fast growth and aquatic lifestyle

Codon-substitution models for heterogeneous selection pressure at amino acid sites

BIO::Phylo-phyloinformatic analysis using perl

Bio.Phylo: A unified toolkit for processing, analyzing and visualizing phylogenetic trees in Biopython

PAML 4: phylogenetic analysis by maximum likelihood

Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation

P304

1635-1638

http://www.w3.org/2001/XMLSchema#string

P31

scholarly article

P356

10.1093/MOLBEV/MSW046

http://www.w3.org/2001/XMLSchema#string

P433

6

http://www.w3.org/2001/XMLSchema#string

P478

33

http://www.w3.org/2001/XMLSchema#string

P50

François Serra

P577

2016-02-26T00:00:00Z

http://www.w3.org/2001/XMLSchema#dateTime

P5875

296193199

http://www.w3.org/2001/XMLSchema#string

P698

26921390

http://www.w3.org/2001/XMLSchema#string

P921

P932

4868116

http://www.w3.org/2001/XMLSchema#string