Analysis of codon usage diversity of bacterial genes with a self-organizing map (SOM): characterization of horizontally transferred genes with emphasis on the E. coli O157 genome.
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Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collectionSynonymous codon usage is subject to selection in thermophilic bacteria.Analysis of codon usage and nucleotide composition bias in poliovirusesPostgenomics: Proteomics and Bioinformatics in Cancer ResearchGene prediction using the Self-Organizing Map: automatic generation of multiple gene modelsGenomic and proteomic adaptations to growth at high temperatureDirectional and reoccurring sequence change in zoonotic RNA virus genomes visualized by time-series word countMetagenomic and biochemical characterizations of sulfur oxidation metabolism in uncultured large sausage-shaped bacterium in hot spring microbial matsEvolutionary changes in vertebrate genome signatures with special focus on coelacanthThe mitochondrial genome of the 'twisted-wing parasite' Mengenilla australiensis (Insecta, Strepsiptera): a comparative studyA flexible representation of omic knowledge for thorough analysis of microarray data.Novel bioinformatics strategies for prediction of directional sequence changes in influenza virus genomes and for surveillance of potentially hazardous strains.Highly-parallel metabolomics approaches using LC-MS for pharmaceutical and environmental analysis.Prediction of directional changes of influenza A virus genome sequences with emphasis on pandemic H1N1/09 as a model case.Systems biology in the context of big data and networks.First genome data from uncultured upland soil cluster alpha methanotrophs provide further evidence for a close phylogenetic relationship to Methylocapsa acidiphila B2 and for high-affinity methanotrophy involving particulate methane monooxygenase.A problem in multivariate analysis of codon usage data and a possible solution.P-value based visualization of codon usage data.A Novel Bioinformatics Strategy to Analyze Microbial Big Sequence Data for Efficient Knowledge Discovery: Batch-Learning Self-Organizing Map (BLSOM).Predicting state transitions in the transcriptome and metabolome using a linear dynamical system model.Codon usage between genomes is constrained by genome-wide mutational processes.Engineering microorganisms based on molecular evolutionary analysis: a succinate production case studyPRIMe Update: innovative content for plant metabolomics and integration of gene expression and metabolite accumulationA novel approach, based on BLSOMs (Batch Learning Self-Organizing Maps), to the microbiome analysis of ticks.The genome of Pelotomaculum thermopropionicum reveals niche-associated evolution in anaerobic microbiota.Informatics for unveiling hidden genome signaturesG-InforBIO: integrated system for microbial genomics.Bioinformatics tools for cancer metabolomics.Codon usage and codon context bias in Xanthophyllomyces dendrorhous.Integration of transcriptomics and metabolomics for understanding of global responses to nutritional stresses in Arabidopsis thaliana.Multiple Evolutionary Selections Involved in Synonymous Codon Usages in the Streptococcus agalactiae GenomeMetabolomics approach for determining growth-specific metabolites based on Fourier transform ion cyclotron resonance mass spectrometryNotable clustering of transcription-factor-binding motifs in human pericentric regions and its biological significance.Genome signatures, self-organizing maps and higher order phylogenies: a parametric analysisHorizontally Transferred Genetic Elements in the Tsetse Fly Genome: An Alignment-Free Clustering Approach Using Batch Learning Self-Organising Map (BLSOM).Network analysis for gene discovery in plant-specialized metabolism.Development of self-compressing BLSOM for comprehensive analysis of big sequence data.Analysing codon usage bias of cyprinid herpesvirus 3 and adaptation of this virus to the hosts.Visualization of genome signatures of eukaryote genomes by batch-learning self-organizing map with a special emphasis on Drosophila genomes.Nucleotide composition determines the role of translational efficiency in human genes.
P2860
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P2860
Analysis of codon usage diversity of bacterial genes with a self-organizing map (SOM): characterization of horizontally transferred genes with emphasis on the E. coli O157 genome.
description
2001 nî lūn-bûn
@nan
2001 թուականի Հոկտեմբերին հրատարակուած գիտական յօդուած
@hyw
2001 թվականի հոտեմբերին հրատարակված գիտական հոդված
@hy
2001年の論文
@ja
2001年論文
@yue
2001年論文
@zh-hant
2001年論文
@zh-hk
2001年論文
@zh-mo
2001年論文
@zh-tw
2001年论文
@wuu
name
Analysis of codon usage divers ...... is on the E. coli O157 genome.
@ast
Analysis of codon usage divers ...... is on the E. coli O157 genome.
@en
type
label
Analysis of codon usage divers ...... is on the E. coli O157 genome.
@ast
Analysis of codon usage divers ...... is on the E. coli O157 genome.
@en
prefLabel
Analysis of codon usage divers ...... is on the E. coli O157 genome.
@ast
Analysis of codon usage divers ...... is on the E. coli O157 genome.
@en
P2093
P1433
P1476
Analysis of codon usage divers ...... is on the E. coli O157 genome.
@en
P2093
Kinouchi M
P356
10.1016/S0378-1119(01)00673-4
P407
P577
2001-10-01T00:00:00Z