Genome-wide analysis of ETS-family DNA-binding in vitro and in vivo - Wikidata - thesis-toulmin - TriplyDB

Genome-wide analysis of ETS-family DNA-binding in vitro and in vivo

Genome-wide analysis of ETS-family DNA-binding in vitro and in vivo

http://www.wikidata.org/entity/Q34000149

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Transcriptional activation of OCT4 by the ETS transcription factor PEA3 in NCCIT human embryonic carcinoma cells Activin/Nodal signaling controls divergent transcriptional networks in human embryonic stem cells and in endoderm progenitors UniPROBE, update 2011: expanded content and search tools in the online database of protein-binding microarray data on protein-DNA interactions MUSI: an integrated system for identifying multiple specificity from very large peptide or nucleic acid data sets Genomic regions flanking E-box binding sites influence DNA binding specificity of bHLH transcription factors through DNA shape Dry and wet approaches for genome-wide functional annotation of conventional and unconventional transcriptional activators Regulation of endothelial homeostasis, vascular development and angiogenesis by the transcription factor ERG Therapeutic opportunities in Ewing sarcoma: EWS-FLI inhibition via LSD1 targeting May the Best Molecule Win: Competition ESI Mass Spectrometry Sequencing Overview of Ewing Sarcoma: A Journey across Genomic, Epigenomic and Transcriptomic Landscapes Molecular mechanisms of ETS transcription factor-mediated tumorigenesis Preparing the first responders: building the inflammatory transcriptome from the ground up Regulatory Principles Governing Tissue Specificity of Developmental Enhancers Using protein-binding microarrays to study transcription factor specificity: homologs, isoforms and complexes A single gene target of an ETS-family transcription factor determines neuronal CO2-chemosensitivity A small molecule inhibitor of ETV1, YK-4-279, prevents prostate cancer growth and metastasis in a mouse xenograft model Autoinhibition of ETV6 (TEL) DNA Binding: Appended Helices Sterically Block the ETS Domain Steric Mechanism of Auto-Inhibitory Regulation of Specific and Non-Specific DNA Binding by the ETS Transcriptional Repressor ETV6 DNA-dependent formation of transcription factor pairs alters their binding specificity Protein-DNA binding in high-resolution Genome-wide binding studies reveal DNA binding specificity mechanisms and functional interplay amongst Forkhead transcription factors YK-4-279 inhibits ERG and ETV1 mediated prostate cancer cell invasion The role of response elements organization in transcription factor selectivity: the IFN-β enhanceosome example 1,25-dihydroxyvitamin D(3) regulation of fibroblast growth factor-23 expression in bone cells: evidence for primary and secondary mechanisms modulated by leptin and interleukin-6 Conservation of transcription factor binding specificities across 600 million years of bilateria evolution Association of levels of fasting glucose and insulin with rare variants at the chromosome 11p11.2-MADD locus: Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) Consortium Targeted Sequencing Study GATA2 haploinsufficiency caused by mutations in a conserved intronic element leads to MonoMAC syndrome Targeting the DNA-binding activity of the human ERG transcription factor using new heterocyclic dithiophene diamidines The mutational landscape of lethal castration-resistant prostate cancer Annotation of functional variation in personal genomes using RegulomeDB Structures of the Ets Protein DNA-binding Domains of Transcription Factors Etv1, Etv4, Etv5, and Fev: DETERMINANTS OF DNA BINDING AND REDOX REGULATION BY DISULFIDE BOND FORMATION.Reduced dosage of ERF causes complex craniosynostosis in humans and mice and links ERK1/2 signaling to regulation of osteogenesis.ChIPBase: a database for decoding the transcriptional regulation of long non-coding RNA and microRNA genes from ChIP-Seq data.Bayesian hierarchical model of protein-binding microarray k-mer data reduces noise and identifies transcription factor subclasses and preferred k-mers Arpeggio: harmonic compression of ChIP-seq data reveals protein-chromatin interaction signatures.A comparative analysis of transcription factor binding models learned from PBM, HT-SELEX and ChIP data.UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions Inferring dynamic gene regulatory networks in cardiac differentiation through the integration of multi-dimensional data.Systematic search for enhancer elements and somatic allelic imbalance at seven low-penetrance colorectal cancer predisposition loci.Functional human GRIN2B promoter polymorphism and variation of mental processing speed in older adults.

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Genome-wide analysis of ETS-family DNA-binding in vitro and in vivo

http://www.wikidata.org/entity/Q34000149

description

2010 nî lūn-bûn

@nan

2010 թուականի Յունիսին հրատարակուած գիտական յօդուած

@hyw

2010 թվականի հունիսին հրատարակված գիտական հոդված

@hy

2010年の論文

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2010年学术文章

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2010年学术文章

@zh-cn

2010年学术文章

@zh-hans

2010年学术文章

@zh-my

2010年学术文章

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2010年學術文章

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name

Genome-wide analysis of ETS-family DNA-binding in vitro and in vivo

@ast

Genome-wide analysis of ETS-family DNA-binding in vitro and in vivo

@en

Genome-wide analysis of ETS-family DNA-binding in vitro and in vivo

@nl

type

label

Genome-wide analysis of ETS-family DNA-binding in vitro and in vivo

@ast

Genome-wide analysis of ETS-family DNA-binding in vitro and in vivo

@en

Genome-wide analysis of ETS-family DNA-binding in vitro and in vivo

@nl

prefLabel

Genome-wide analysis of ETS-family DNA-binding in vitro and in vivo

@ast

Genome-wide analysis of ETS-family DNA-binding in vitro and in vivo

@en

Genome-wide analysis of ETS-family DNA-binding in vitro and in vivo

@nl

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The EMBO Journal

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Genome-wide analysis of ETS-family DNA-binding in vitro and in vivo

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Andrew R Gehrke

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Gwenael Badis

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Hendrik G Stunnenberg

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Jussi Taipale

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Martha L Bulyk

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Martin Bonke

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Michael F Berger

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Shaheynoor Talukder

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Teemu Kivioja

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Timothy R Hughes

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PDEF, a novel prostate epithelium-specific ets transcription factor, interacts with the androgen receptor and activates prostate-specific antigen gene expression

Gene fusion with an ETS DNA-binding domain caused by chromosome translocation in human tumours

Fusion of the TEL gene on 12p13 to the AML1 gene on 21q22 in acute lymphoblastic leukemia

Characterization of SAP-1, a protein recruited by serum response factor to the c-fos serum response element

Serum response factor binding sites differ in three human cell types

TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes

Spatial flexibility in ternary complexes between SRF and its accessory proteins

An ORFeome-based analysis of human transcription factor genes and the construction of a microarray to interrogate their expression

Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data

An atlas of combinatorial transcriptional regulation in mouse and man

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2147-2160

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scholarly article

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10.1038/EMBOJ.2010.106

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13

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29

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Markku Varjosalo

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2010-06-01T00:00:00Z

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44643991

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20517297

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2905244

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