Estimating autozygosity from high-throughput information: effects of SNP density and genotyping errors - Wikidata - thesis-toulmin - TriplyDB

Estimating autozygosity from high-throughput information: effects of SNP density and genotyping errors

Estimating autozygosity from high-throughput information: effects of SNP density and genotyping errors

http://www.wikidata.org/entity/Q34251575

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Recovery of native genetic background in admixed populations using haplotypes, phenotypes, and pedigree information--using Cika cattle as a case breed Genomic data as the "hitchhiker's guide" to cattle adaptation: tracking the milestones of past selection in the bovine genome Identification of genomic regions associated with inbreeding depression in Holstein and Jersey dairy cattle.Assessment of autozygosity in Nellore cows (Bos indicus) through high-density SNP genotypes.Genome-wide estimates of coancestry, inbreeding and effective population size in the Spanish Holstein population Characterizing homozygosity across United States, New Zealand and Australian Jersey cow and bull populations Genomic analysis for managing small and endangered populations: a case study in Tyrol Grey cattle Estimation of inbreeding using pedigree, 50k SNP chip genotypes and full sequence data in three cattle breeds.Investigation of regions impacting inbreeding depression and their association with the additive genetic effect for United States and Australia Jersey dairy cattle.Inbreeding and purging at the genomic Level: the Chillingham cattle reveal extensive, non-random SNP heterozygosity.The use of coancestry based on shared segments for maintaining genetic diversity.A genome-wide perspective about the diversity and demographic history of seven Spanish goat breeds.Novel Graphical Analyses of Runs of Homozygosity among Species and Livestock Breeds.Characterization and management of long runs of homozygosity in parental nucleus lines and their associated crossbred progeny Inbreeding depression in livestock species: review and meta-analysis.Estimation of inbreeding depression on female fertility in the Finnish Ayrshire population.Genetic diversity analyses reveal first insights into breed-specific selection signatures within Swiss goat breeds.Runs of homozygosity: current knowledge and applications in livestock.Heterozygosity Ratio, a Robust Global Genomic Measure of Autozygosity and Its Association with Height and Disease Risk Analysis of runs of homozygosity and their relationship with inbreeding in five cattle breeds farmed in Italy.Genome-wide scan for runs of homozygosity identifies potential candidate genes associated with local adaptation in Valle del Belice sheep.Cross-Species Application of SNP Chips is Not Suitable for Identifying Runs of Homozygosity.Population structure and genomic inbreeding in nine Swiss dairy cattle populations.Age-based partitioning of individual genomic inbreeding levels in Belgian Blue cattle.Genomic inbreeding estimation in small populations: evaluation of runs of homozygosity in three local dairy cattle breeds.A heuristic method to identify runs of homozygosity associated with reduced performance in livestock.Genomic inbreeding depression for climatic adaptation of tropical beef cattle.Inbreeding and runs of homozygosity before and after genomic selection in North American Holstein cattle.Trends in genome-wide and region-specific genetic diversity in the Dutch-Flemish Holstein-Friesian breeding program from 1986 to 2015.Founder-specific inbreeding depression affects racing performance in Thoroughbred horses.Genome-Wide Characterization of Selection Signatures and Runs of Homozygosity in Ugandan Goat Breeds Misidentification of runs of homozygosity islands in cattle caused by interference with copy number variation or large intermarker distances High-density Genotyping reveals Genomic Characterization, Population Structure and Genetic Diversity of Indian Mithun (Bos frontalis)

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Estimating autozygosity from high-throughput information: effects of SNP density and genotyping errors

http://www.wikidata.org/entity/Q34251575

description

2013 nî lūn-bûn

@nan

2013 թուականի Հոկտեմբերին հրատարակուած գիտական յօդուած

@hyw

2013 թվականի հոտեմբերին հրատարակված գիտական հոդված

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2013年の論文

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2013年論文

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2013年論文

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2013年論文

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2013年論文

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2013年論文

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2013年论文

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name

Estimating autozygosity from h ...... density and genotyping errors

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Estimating autozygosity from h ...... density and genotyping errors

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Estimating autozygosity from h ...... density and genotyping errors

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Estimating autozygosity from h ...... density and genotyping errors

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Estimating autozygosity from h ...... density and genotyping errors

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Estimating autozygosity from h ...... density and genotyping errors

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prefLabel

Estimating autozygosity from h ...... density and genotyping errors

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Estimating autozygosity from h ...... density and genotyping errors

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Estimating autozygosity from h ...... density and genotyping errors

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Genetics Selection Evolution

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Estimating autozygosity from h ...... density and genotyping errors

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Ino Curik

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Johann Sölkner

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Maja Ferenčaković

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P2860

Detecting autozygosity through runs of homozygosity: a comparison of three autozygosity detection algorithms

A note on exact tests of Hardy-Weinberg equilibrium

Long homozygous chromosomal segments in reference families from the centre d'Etude du polymorphisme humain

PLINK: a tool set for whole-genome association and population-based linkage analyses

Estimation of the inbreeding coefficient through use of genomic data

Genomic runs of homozygosity record population history and consanguinity

Quantification of inbreeding due to distant ancestors and its detection using dense single nucleotide polymorphism data

Genetic characterization of northeastern Italian population isolates in the context of broader European genetic diversity

Runs of homozygosity and population history in cattle

cgaTOH: extended approach for identifying tracts of homozygosity.

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