Whole-genome haplotype reconstruction using proximity-ligation and shotgun sequencing
about
P1343
The second decade of 3C technologies: detailed insights into nuclear organizationPairing and anti-pairing: a balancing act in the diploid genome4D nucleomes in single cells: what can computational modeling reveal about spatial chromatin conformation?Genetic variation and the de novo assembly of human genomesAnalysis methods for studying the 3D architecture of the genomeAn Overview of Genome Organization and How We Got There: from FISH to Hi-CHigh-throughput sequencing technologiesEpigenomic comparison reveals activation of "seed" enhancers during transition from naive to primed pluripotencyAdvances in genome studies in plants and animalsReconstructing A/B compartments as revealed by Hi-C using long-range correlations in epigenetic data.HiFive: a tool suite for easy and efficient HiC and 5C data analysisHiC-Pro: an optimized and flexible pipeline for Hi-C data processing.FastHiC: a fast and accurate algorithm to detect long-range chromosomal interactions from Hi-C data.References for Haplotype Imputation in the Big Data Era.Extending partial haplotypes to full genome haplotypes using chromosome conformation capture data.An integrated 3-Dimensional Genome Modeling Engine for data-driven simulation of spatial genome organization.Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation.New advances in sequence assembly.Structural organization of the inactive X chromosome in the mouse.WinHAP2: an extremely fast haplotype phasing program for long genotype sequencesDecoding the role of chromatin architecture in development: coming closer to the end of the tunnel.Contact genomics: scaffolding and phasing (meta)genomes using chromosome 3D physical signatures.CTCF-Mediated Human 3D Genome Architecture Reveals Chromatin Topology for Transcription.Genome-wide mapping and analysis of chromosome architecture.Distance-based assessment of the localization of functional annotations in 3D genome reconstructions.Whole-genome haplotyping approaches and genomic medicine.The Hitchhiker's guide to Hi-C analysis: practical guidelines.CRISPR reveals a distal super-enhancer required for Sox2 expression in mouse embryonic stem cells.Integrative analysis of haplotype-resolved epigenomes across human tissues.Comparison of Hi-C results using in-solution versus in-nucleus ligationAccurate identification of centromere locations in yeast genomes using Hi-C.Complete haplotype phasing of the MHC and KIR loci with targeted HaploSeq.Human body epigenome maps reveal noncanonical DNA methylation variation.Chromatin architecture reorganization during stem cell differentiation.Haplotyping germline and cancer genomes with high-throughput linked-read sequencingChromosome-scale shotgun assembly using an in vitro method for long-range linkageEpstein-Barr virus oncoprotein super-enhancers control B cell growthStructural heterogeneity and functional diversity of topologically associating domains in mammalian genomes.SNPsplit: Allele-specific splitting of alignments between genomes with known SNP genotypes.A new class of temporarily phenotypic enhancers identified by CRISPR/Cas9-mediated genetic screening.
P2860
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P2860
Whole-genome haplotype reconstruction using proximity-ligation and shotgun sequencing
description
2013 nî lūn-bûn
@nan
2013 թուականի Նոյեմբերին հրատարակուած գիտական յօդուած
@hyw
2013 թվականի նոյեմբերին հրատարակված գիտական հոդված
@hy
2013年の論文
@ja
2013年論文
@yue
2013年論文
@zh-hant
2013年論文
@zh-hk
2013年論文
@zh-mo
2013年論文
@zh-tw
2013年论文
@wuu
name
Whole-genome haplotype reconstruction using proximity-ligation and shotgun sequencing
@ast
Whole-genome haplotype reconstruction using proximity-ligation and shotgun sequencing
@en
Whole-genome haplotype reconstruction using proximity-ligation and shotgun sequencing
@nl
type
label
Whole-genome haplotype reconstruction using proximity-ligation and shotgun sequencing
@ast
Whole-genome haplotype reconstruction using proximity-ligation and shotgun sequencing
@en
Whole-genome haplotype reconstruction using proximity-ligation and shotgun sequencing
@nl
prefLabel
Whole-genome haplotype reconstruction using proximity-ligation and shotgun sequencing
@ast
Whole-genome haplotype reconstruction using proximity-ligation and shotgun sequencing
@en
Whole-genome haplotype reconstruction using proximity-ligation and shotgun sequencing
@nl
P2093
P2860
P356
P1433
P1476
Whole-genome haplotype reconstruction using proximity-ligation and shotgun sequencing
@en
P2093
Jesse R Dixon
Siddarth Selvaraj
Vikas Bansal
P2860
P2888
P304
P356
10.1038/NBT.2728
P4510
P577
2013-11-03T00:00:00Z