Widespread contribution of transposable elements to the innovation of gene regulatory networks - Wikidata - thesis-toulmin - TriplyDB

Widespread contribution of transposable elements to the innovation of gene regulatory networks

Widespread contribution of transposable elements to the innovation of gene regulatory networks

http://www.wikidata.org/entity/Q34590420

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Spotting the enemy within: Targeted silencing of foreign DNA in mammalian genomes by the Krüppel-associated box zinc finger protein family Fast turnover of genome transcription across evolutionary time exposes entire non-coding DNA to de novo gene emergence Evidence for a common evolutionary rate in metazoan transcriptional networks Multilevel Selection Theory and the Evolutionary Functions of Transposable Elements Detecting endogenous retrovirus-driven tissue-specific gene transcription Comprehensive characterization, annotation and innovative use of Infinium DNA methylation BeadChip probes Human population-specific gene expression and transcriptional network modification with polymorphic transposable elements.Regulatory activities of transposable elements: from conflicts to benefits.Comparative DNA methylome analysis of endometrial carcinoma reveals complex and distinct deregulation of cancer promoters and enhancers.Regulatory evolution of innate immunity through co-option of endogenous retroviruses.RelocaTE2: a high resolution transposable element insertion site mapping tool for population resequencing.Principles of regulatory information conservation between mouse and human.A call for benchmarking transposable element annotation methods.Mariner Transposons Contain a Silencer: Possible Role of the Polycomb Repressive Complex 2.Evidence for the role of transposons in the recruitment of cis-regulatory motifs during the evolution of C4 photosynthesis Population and clinical genetics of human transposable elements in the (post) genomic era.Transposable Elements in Human Cancer: Causes and Consequences of Deregulation Altering Genomic Integrity: Heavy Metal Exposure Promotes Transposable Element-Mediated Damage.Long Terminal Repeats: From Parasitic Elements to Building Blocks of the Transcriptional Regulatory Repertoire How retrotransposons shape genome regulation.Hide and seek: how chromatin-based pathways silence retroelements in the mammalian germline RNA as a fundamental component of interphase chromosomes: could repeats prove key?Chromatin variation associated with liver metabolism is mediated by transposable elements.TET-dependent regulation of retrotransposable elements in mouse embryonic stem cells.An evolutionary classification of genomic function.The double-edged sword of (re)expression of genes by hypomethylating agents: from viral mimicry to exploitation as priming agents for targeted immune checkpoint modulation.Evolutionary impact of transposable elements on genomic diversity and lineage-specific innovation in vertebrates.Evolution of Epigenetic Regulation in Vertebrate Genomes.Julian Davies and the discovery of kanamycin resistance transposon Tn5.The impact of transposable elements on mammalian development.Suppression of Transposable Elements in Leukemic Stem Cells.Systematic identification and characterization of regulatory elements derived from human endogenous retroviruses.Genome-wide mapping of infection-induced SINE RNAs reveals a role in selective mRNA export.Isolation and cultivation of naive-like human pluripotent stem cells based on HERVH expression.Tissue-specific DNA methylation is conserved across human, mouse, and rat, and driven by primary sequence conservation Long terminal repeats power evolution of genes and gene expression programs in mammalian oocytes and zygotes.Human Retrotransposon Insertion Polymorphisms Are Associated with Health and Disease via Gene Regulatory Phenotypes Expression dynamics and relations with nearby genes of rat transposable elements across 11 organs, 4 developmental stages and both sexes.Transposable elements are the primary source of novelty in primate gene regulation.Biotagging of Specific Cell Populations in Zebrafish Reveals Gene Regulatory Logic Encoded in the Nuclear Transcriptome.

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Widespread contribution of transposable elements to the innovation of gene regulatory networks

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2014 nî lūn-bûn

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2014 թուականի Հոկտեմբերին հրատարակուած գիտական յօդուած

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Widespread contribution of tra ...... on of gene regulatory networks

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Peter Edge

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Ting Wang

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Xiaoyun Xing

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Zhihai Ma

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Initial sequencing and analysis of the human genome

Mobile DNA and the TE-Thrust hypothesis: supporting evidence from the primates

DNA methylation patterns and epigenetic memory

An integrated encyclopedia of DNA elements in the human genome

Selfish genes, the phenotype paradigm and genome evolution

Initial sequencing and comparative analysis of the mouse genome

The origin and behavior of mutable loci in maize.

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes.

Oxidants, antioxidants, and the degenerative diseases of aging

Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities

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